LOCUS CK335033 457 bp mRNA linear EST 12-MAY-2010 DEFINITION H3133F03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3133F03 5', mRNA sequence. ACCESSION CK335033 VERSION CK335033.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 457) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3133 row: F column: 03 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..457 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3133F03-5" /db_xref="taxon:10090" /clone="H3133F03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 123 a 102 c 106 g 126 t ORIGIN 1 aactgaagtg gacatagttg cacaaagcac ttacggaacg agggaacctt gttctttgcc 61 ttccttcacc taagcatagg ggaaaactct cagggcccta ttaagataaa gatttataac 121 ctttataatg ttcttcacca gagacacctt cttgtgattt ttatttcagt ctgactgtgg 181 gcaagggggg tgtgtgtgtg agtgaaatgg gtgtactggc gtgtcacgtg actgtcatag 241 ccccgccccc tgctgtgtat taaaagtcaa cagctgtata tagcttggcc tgtattaacc 301 aagtcataat cggcacacga gcgtcaacaa aagccataga agagaaagca atagtgcttg 361 aatttccccc caactcatct cagcactgtg ccacggcagg gctcgggcaa gacaggaaaa 421 gcctttggtt tcttgatgac tgtacattta tttctct //