LOCUS CK334988 590 bp mRNA linear EST 12-MAY-2010 DEFINITION H3129G01-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3129G01 5', mRNA sequence. ACCESSION CK334988 VERSION CK334988.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 590) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3129 row: G column: 01 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..590 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3129G01-5" /db_xref="taxon:10090" /clone="H3129G01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 202 a 134 c 117 g 137 t ORIGIN 1 ggagaaacac agaagcgaat tggaacagct gaccgagagc tgattcaaac atcagcctta 61 aattccctca ctcctttaag aaactttata gaaggggatt acaaaacaat cgcaaaagaa 121 aggaaactat tacagaataa gagactggat ttggatgctg caaaaacaag actaaaaaag 181 gcaaaagctg cagaaactaa aagttcatct gaacaggaat tgagaataac tcaaagtgaa 241 tttgatcgtc aggcagagat tacccgactc ctgcttgagg gaatcagcag tacacacgcc 301 catcatctcc gctgtctgaa tgactttgta gaagcccaga tgacttacta tgcacagtgt 361 taccagtata tgctagacct acagaagcaa ctgggaagtt ttccatccaa ttatctttct 421 aacaacaatc agacctctgg gacaccagtg ccatatgctt tgtcaaatgc aattggtcct 481 tctgcccagg cttcaacggg tagccttgta atcacctgtc cttctaacct caatgacctt 541 aaagaatcca gcaacaacag gaaggctagg gtcccctatg attatgatgc //