LOCUS CK334881 515 bp mRNA linear EST 12-MAY-2010 DEFINITION H3118C02-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3118C02 5', mRNA sequence. ACCESSION CK334881 VERSION CK334881.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 515) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3118 row: C column: 02 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..515 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3118C02-5" /db_xref="taxon:10090" /clone="H3118C02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 160 a 79 c 93 g 183 t ORIGIN 1 ctttaaatat ttcttcatta attccactga tagaaaaatg tcttctctag aaacaaagtt 61 tatttttaaa cactgttcat ggaattaaac tatggcattg tgtacttatg tgaagttgta 121 gaacaaccaa aacctatcaa aagtgcttga aataagatta atgattgact gggaaagggc 181 acataggaat tttctcaagt aataaaaata tcctgtttgt ttatagaggt gtagctttca 241 aaactgacct gagatttgta aattatatct caactttaaa gaaacttgat aaatagtctt 301 gatgaatagt ttttttctca tgttgtacca ttttgcaaaa tactttcaac tcccttccat 361 aggtaggaaa catcctactg ttgaaatgtc catgtaatta cttctgagaa gtatgtgttt 421 gtgcatgtgt gcatgcctat ggctatgtgt gtagaggcca gagcagtgtg tcagatgtca 481 tgttctttta ctctgtagct tactgccttg ggaca //