LOCUS CK334538 723 bp mRNA linear EST 12-MAY-2010 DEFINITION H3047G12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3047G12 5', mRNA sequence. ACCESSION CK334538 VERSION CK334538.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 723) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3047 row: G column: 12 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..723 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3047G12-5" /db_xref="taxon:10090" /clone="H3047G12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 163 a 184 c 162 g 214 t ORIGIN 1 gtgagttaca atgacactgc cccaaggatc ctgttttggg cacaaaactt ctctgtggca 61 tacaaagacg agtggaaaga cttgacctcc ctcacctttg gtgtggagaa tcttaacttg 121 accggctcct tctggaatga ctcctttgcc atgctttcac tgacctatga gccactcttt 181 ggtgcaacag tgacattcaa gttcattctg gctagtcgct tctatccagt gtctgcccga 241 tattggtttg ccatggaacg acttgaaatc cacagcaatg gctctgttgc ccatttcaat 301 gtttcccaag tcacaggacc tagcatctat tctttccact gtgagtacgt cagcagtgtg 361 agcaagaaag gcaatctcct tgtgaccaac gtgccctcag tctggcagat gactcttcat 421 aacttccaga tccaggcctt caatgtgact ggtgaacagt tctcctatgc tagcgactgt 481 gctggtttct tctctccggg catctggatg ggtctgctca ccaccctctt catgcttttc 541 atattcacct atggtctgca catgatactc agcctaaaga ccatggatcg ctttgatgac 601 cacaagggcc ccaccatcac tttgacccag attgtgtgac atacacctga gaggaattga 661 gggagtattg gtgtctaggt tgtcatgttt ctgttttgtg acacagtgga tggaaaggtt 721 tgt //