LOCUS CK334421 566 bp mRNA linear EST 12-MAY-2010 DEFINITION H3025B01-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3025B01 5', mRNA sequence. ACCESSION CK334421 VERSION CK334421.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 566) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3025 row: B column: 01 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..566 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3025B01-5" /db_xref="taxon:10090" /clone="H3025B01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 138 a 139 c 155 g 134 t ORIGIN 1 gtgaaattct gccggcagct ctttggaggc ttttccatgt tactgtggat cggggccatt 61 ctttgtttcc tggcttatgg catccgaagt gctacagaag aggaaccgcc aaacgatgat 121 ctgtacctcg gggtggtgct ctctgctgta gtcatcataa ctggctgttt ctcctattat 181 caagaagcaa aaagctccaa gatcatggaa tccttcaaga acatggtccc tcagcaagcc 241 cttgtgattc gaaatggaga gaaaatgagc atcaatgcgg aggatgtcgt cgtcggggat 301 ctggtggagg tgaaaggggg agaccggatc cctgctgatc ttagaatcat atctgcaaac 361 ggctgcaagg tggataactc ctcactcact ggtgaatcag aaccccagac tcggtccccg 421 gatttcacaa acgagaaccc cttggagaca aggaacattg ccttcttctc aaccaacggt 481 gtggaaggaa ccgcacgtgg catcgtcgtg tacactgggg accgcaccgt gatgggcagg 541 attgccacgc ttgcctctgg gctaga //