LOCUS CK334188 633 bp mRNA linear EST 12-MAY-2010 DEFINITION H3007H05-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3007H05 5', mRNA sequence. ACCESSION CK334188 VERSION CK334188.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 633) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3007 row: H column: 05 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..633 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3007H05-5" /db_xref="taxon:10090" /clone="H3007H05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 200 a 124 c 153 g 156 t ORIGIN 1 agagagagag agaagaaaaa gaaaaaagat ctgaaacaaa ttcagatttt acagttaaaa 61 ggaaaccagt gaggggtgaa gtacttgtgt gtaagtatga agagctgagg cataagtgcc 121 acgtgtttgt aatcctagat ctggagagct agagacaggt agatccgagt ggcttgttgg 181 ctacccaaca aagttaactg caagtttcag cttccagtga gaggccatct ctaaaagcaa 241 agtggagtgt gagatagttc agctggtaat gctcatcatg gagcctggcg gcctgagttt 301 gactcctagg acacatgtgg taggtaggag agaactgact catagattgt cctctggctt 361 ctgcatgtgt gtgccacaac acacatacat ccatgtacaa cacacatgga tagaaacacg 421 tgggcagctc ctgaagaaca acacctgtac ttgctgtcta gccttcactg tgcacatgca 481 ccagtaaaca gtaaaccgca cacacatgaa cactgaaaag agaaaatcat ggtttttgta 541 taacttcctt gagctagaaa cagagtttag gaagtgtcgt gatctaccac tttccaggtt 601 cttagcatct cactttgaag attatcagtt ctg //