LOCUS BX538049 4385 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686L15151 (from clone DKFZp686L15151).
ACCESSION BX538049
VERSION BX538049.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4385)
AUTHORS Bloecker H., Boecher M., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology
Ltd., Braunschweig/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686L15151) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4385
/db_xref="H-InvDB:HIT000054833"
/organism="Homo sapiens"
/map="9q31.2-32"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686L15151"
/tissue_type="human colon endothel primary cell culture"
/db_xref="taxon:9606"
CDS <1..3972
/codon_start=1
/gene="DKFZp686L15151"
/product="hypothetical protein"
/note="hypothetical protein, N-terminus truncated"
/db_xref="GOA:Q4LDE5"
/db_xref="H-InvDB:HIT000054833.15"
/db_xref="HGNC:HGNC:15985"
/db_xref="InterPro:IPR000152"
/db_xref="InterPro:IPR000436"
/db_xref="InterPro:IPR000742"
/db_xref="InterPro:IPR001759"
/db_xref="InterPro:IPR001881"
/db_xref="InterPro:IPR002035"
/db_xref="InterPro:IPR003410"
/db_xref="InterPro:IPR009030"
/db_xref="InterPro:IPR011641"
/db_xref="InterPro:IPR013032"
/db_xref="InterPro:IPR013320"
/db_xref="InterPro:IPR018097"
/db_xref="InterPro:IPR035976"
/db_xref="InterPro:IPR036465"
/db_xref="UniProtKB/Swiss-Prot:Q4LDE5"
/protein_id="CAD97988.1"
/translation="RHWHSESPLMCVPLDCGKPPPIQNGFMKGENFEVGSKVQFFCNE
GYELVGGSSWTCQKSGKWNKKSNPKCMPAKCPEPPLLENQLVLKELTTEVGVVTFSCK
EGHVLQGPSVLKCLPSQQWNDSFPVCKIVLCTPPPLISFGVPIPSSALHFGSTVKYSC
VGGFFLRGNSTTLCQPDGTWSSPLPECVPVECPQPEEIPNGIIDVQGLAYLSTALYTC
KPGFELVGNTTTLCGENGHWLGGKPTCKAIECLKPKEILNGKFSYTDLHYGQTVTYSC
NRGFRLEGPSALTCLETGDWDVDAPSCNAIHCDSPQPIENGFVEGADYSYGAIIIYSC
FPGFQVAGHAMQTCEESGWSSSIPTCMPIDCGLPPHIDFGDCTKLKDDQGYFEQEDDM
MEVPYVTPHPPYHLGAVAKTWENTKESPATHSSNFLYGTMVSYTCNPGYELLGNPVLI
CQEDGTWNGSAPSCISIECDLPTAPENGFLRFTETSMGSAVQYSCKPGHILAGSDLRL
CLENRKWSGASPRCEAISCKKPNPVMNGSIKGSNYTYLSTLYYECDPGYVLNGTERRT
CQDDKNWDEDEPICIPVDCSSPPVSANGQVRGDEYTFQKEIEYTCNEGFLLEGARSRV
CLANGSWSGATPDCVPVRCATPPQLANGVTEGLDYGFMKEVTFHCHEGYILHGAPKLT
CQSDGNWDAEIPLCKPVNCGPPEDLAHGFPNGFSFIHGGHIQYQCFPGYKLHGNSSRR
CLSNGSWSGSSPSCLPCRCSTPVIEYGTVNGTDFDCGKAARIQCFKGFKLLGLSEITC
EADGQWSSGFPHCEHTSCGSLPMIPNAFISETSSWKENVITYSCRSGYVIQGSSDLIC
TEKGVWSQPYPVCEPLSCGSPPSVANAVATGEAHTYESEVKLRCLEGYTMDTDTDTFT
CQKDGRWFPERISCSPKKCPLPESITHILVHGDDFSVNRQVSVSCAEGYTFEGVNISV
CQLDGTWEPPFSDESCSPVSCGKPESPEHGFVVGSKYTFESTIIYQCEPGYELEGNRE
RVCQENRQWSGGVAICKETRCETPLEFLNGKADIENRTTGPNVVYSCNRGYSLEGPSE
AHCTENGTWSHPVPLCKPNPCPVPFVIPENALLSEKEFYVDQNVSIKCREGFLLQGHG
IITCNPDETWTQTSAKCEKISCGPPAHVENAIARGVHYQYGDMITYSCYSGYMLEGFL
RSVCLENGTWTSPPICRAVCRFPCQNGGICQRPNACSCPEGWMGRLCEEPICILPCLN
GGRCVAPYQCDCPPGWTGSRCHTAVCQSPCLNGGKCVRPNRCHCLSSWTGHNCSGKGR
TGF"
regulatory 4205..4210
/regulatory_class="polyA_signal_sequence"
polyA_site 4229
BASE COUNT 1251 a 981 c 1028 g 1125 t
ORIGIN
1 cgccactggc acagtgaatc ccctctgatg tgtgttcctc tcgactgtgg aaaacctccc
61 ccgatccaga atggcttcat gaaaggagaa aactttgaag tagggtccaa ggttcagttt
121 ttctgtaatg agggttatga gcttgttggt ggcagttctt ggacatgtca gaaatctggc
181 aaatggaata agaagtcaaa tccaaagtgc atgcctgcca agtgcccaga gccgcccctc
241 ttggaaaacc agctagtatt aaaggagttg accaccgagg taggagttgt gacattttcc
301 tgtaaagaag ggcatgtcct gcaaggcccc tctgtcctga aatgcttgcc atcccagcaa
361 tggaatgact ctttccctgt ttgtaagatt gttctttgta ccccacctcc cctaatttcc
421 tttggtgtcc ccattccttc ttctgctctt cattttggaa gtactgtcaa gtattcttgt
481 gtaggtgggt ttttcctaag aggaaattct accaccctct gccaacctga tggcacctgg
541 agctctccac tgccagaatg tgttccagta gaatgtcccc aacctgagga aatccccaat
601 ggaatcattg atgtgcaagg ccttgcctat ctcagcacag ctctctatac ctgcaagcca
661 ggctttgaat tggtgggaaa tactaccacc ctttgtggag aaaatggtca ctggcttgga
721 ggaaaaccaa catgtaaagc cattgagtgc ctgaaaccca aggagatttt gaatggcaaa
781 ttctcttaca cggacctaca ctatggacag accgttacct actcttgcaa ccgaggcttt
841 cggctcgaag gtcccagtgc cttgacctgt ttagagacag gtgattggga tgtagatgcc
901 ccatcttgca atgccatcca ctgtgattcc ccacaaccca ttgaaaatgg ttttgtagaa
961 ggtgcagatt acagctatgg tgccataatc atctacagtt gcttccctgg gtttcaggtg
1021 gctggtcatg ccatgcagac ctgtgaagag tcaggatggt caagttccat cccaacatgt
1081 atgccaatag actgtggcct ccctcctcat atagattttg gagactgtac taaactcaaa
1141 gatgaccagg gatattttga gcaagaagac gacatgatgg aagttccata tgtgactcct
1201 caccctcctt atcatttggg agcagtggct aaaacctggg aaaatacaaa ggagtctcct
1261 gctacacatt catcaaactt tctgtatggt accatggttt catacacctg taatccagga
1321 tatgaacttc tggggaaccc tgtgctgatc tgccaggaag atggaacttg gaatggcagt
1381 gcaccatcct gcatttcaat tgaatgtgac ttgcctactg ctcctgaaaa tggctttttg
1441 cgttttacag agactagcat gggaagtgct gtgcagtata gctgtaaacc tggacacatt
1501 ctagcaggct ctgacttaag gctttgtcta gagaatagaa agtggagtgg tgcctcccca
1561 cgctgtgaag ccatttcatg caaaaagcca aatccagtca tgaatggatc catcaaagga
1621 agcaactaca catacctgag cacgttgtac tatgagtgtg accccggata tgtgctgaat
1681 ggcactgaga ggagaacatg ccaggatgac aaaaactggg atgaggatga gcccatttgc
1741 attcctgtgg actgcagttc acccccagtc tcagccaatg gccaggtgag aggagacgag
1801 tacacattcc aaaaagagat tgaatacact tgcaatgaag ggttcttgct tgagggagcc
1861 aggagtcggg tttgtcttgc caatggaagt tggagtggag ccactcccga ctgtgtgcct
1921 gtcagatgtg ccaccccgcc acaactggcc aatggggtga cggaaggcct ggactatggc
1981 ttcatgaagg aagtaacatt ccactgtcac gagggctaca tcttgcacgg tgctccaaaa
2041 ctcacctgtc agtcagatgg caactgggat gcagagattc ctctctgtaa accagtcaac
2101 tgtggacctc ctgaagatct tgcccatggt ttccctaatg gtttttcctt tattcatggg
2161 ggccatatac agtatcagtg ctttcctggt tataagctcc atggaaattc atcaagaagg
2221 tgcctctcca atggctcctg gagtggcagc tcaccttcct gcctgccttg cagatgttcc
2281 acaccagtaa ttgaatatgg aactgtcaat gggacagatt ttgactgtgg aaaggcagcc
2341 cggattcagt gcttcaaagg cttcaagctc ctaggacttt ctgaaatcac ctgtgaagcc
2401 gatggccagt ggagctctgg gttcccccac tgtgaacaca cttcttgtgg ttctcttcca
2461 atgataccaa atgcgttcat cagtgagacc agctcttgga aggaaaatgt gataacttac
2521 agctgcaggt ctggatatgt catacaaggc agttcagatc tgatttgtac agagaaaggg
2581 gtatggagcc agccttatcc agtctgtgag cccttgtcct gtgggtcccc accgtctgtc
2641 gccaatgcag tggcaactgg agaggcacac acctatgaaa gtgaagtgaa actcagatgt
2701 ctggaaggtt atacgatgga tacagataca gatacattca cctgtcagaa agatggtcgc
2761 tggttccctg agagaatctc ctgcagtcct aaaaaatgtc ctctcccgga aagcataaca
2821 catatacttg tacatgggga cgatttcagt gtgaataggc aagtttctgt gtcatgtgca
2881 gaagggtata cctttgaggg agttaacata tcagtatgtc agcttgatgg aacctgggag
2941 ccaccattct ccgatgaatc ttgcagtcca gtttcttgtg ggaaacctga aagtccagaa
3001 catggatttg tggttggcag taaatacacc tttgaaagca caattattta tcagtgtgag
3061 cctggctatg aactagaggg gaacagggaa cgtgtctgcc aggagaacag acagtggagt
3121 ggaggggtgg caatatgcaa agagaccagg tgtgaaactc cacttgaatt tctcaatggg
3181 aaagctgaca ttgaaaacag gacgactgga cccaacgtgg tatattcctg caacagaggc
3241 tacagtcttg aagggccatc tgaggcacac tgcacagaaa atggaacctg gagccaccca
3301 gtccctctct gcaaaccaaa tccatgccct gttccttttg tgattcccga gaatgctctg
3361 ctgtctgaaa aggagtttta tgttgatcag aatgtgtcca tcaaatgtag ggaaggtttt
3421 ctgctgcagg gccacggcat cattacctgc aaccccgacg agacgtggac acagacaagc
3481 gccaaatgtg aaaaaatctc atgtggtcca ccagctcacg tagaaaatgc aattgctcga
3541 ggcgtacatt atcaatatgg agacatgatc acctactcat gttacagtgg atacatgttg
3601 gagggtttcc tgaggagtgt ttgtttagaa aatggaacat ggacatcacc tcctatttgc
3661 agagctgtct gtcgatttcc atgtcagaat gggggcatct gccaacgccc aaatgcttgt
3721 tcctgtccag agggctggat ggggcgcctc tgtgaagaac caatctgcat tcttccctgt
3781 ctgaacggag gtcgctgtgt ggccccttac cagtgtgact gcccgcctgg ctggacgggg
3841 tctcgctgtc atacagctgt ttgccagtct ccctgcttaa atggtggaaa atgtgtaaga
3901 ccaaaccgat gtcactgtct ttcttcttgg acgggacata actgttccgg gaaagggagg
3961 actgggtttt aaccactgca cgaccatctg gctctcccaa aagcaggatc atctctcctc
4021 ggtagtgcct gggcatcctg gaacttatgc aaagaaagtc caacatggtg ctgggtcttg
4081 tttagtaaac ttgttacttg gggttacttt ttttattttg tgatatattt tgttattcct
4141 tgtgacatac tttcttacat gtttccattt ttaaatatgc ctgtattttc tatataaaaa
4201 ttatattaaa tagatgctgc tctaccctca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4381 aaaaa
//