LOCUS BX537615 3500 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686A01173 (from clone DKFZp686A01173).
ACCESSION BX537615
VERSION BX537615.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3500)
AUTHORS Lauber J., Bahr A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Qiagen (Hilden/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686A01173) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..3500
/db_xref="H-InvDB:HIT000054400"
/organism="Homo sapiens"
/chromosome="17q11.2"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686A01173"
/tissue_type="human uterus endothel primary cell culture"
/db_xref="taxon:9606"
CDS join(<1..919,921..2756)
/codon_start=2
/gene="DKFZp686A01173"
/product="hypothetical protein"
/note="similar to Myosin Id (Rattus norvegicus)"
/note="The frame shift was determined manually"
/db_xref="GOA:Q7Z3N6"
/db_xref="H-InvDB:HIT000054400.14"
/db_xref="InterPro:IPR000048"
/db_xref="InterPro:IPR001609"
/db_xref="InterPro:IPR010926"
/db_xref="InterPro:IPR027417"
/db_xref="InterPro:IPR036072"
/db_xref="InterPro:IPR036961"
/db_xref="UniProtKB/TrEMBL:Q7Z3N6"
/protein_id="CAD97800.1"
/translation="KRRSKDTCIVISGESGAGKTEASKYIMQYIAAITNPSQRAEVER
VKNMLLKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGHINNYLLEKSRV
IVQQPGERSFHSFYQLLQGGSEQMLRSLHLQKSLSSYNYIHVGAQLKSSINDAAEFRV
VADAMKVIGFKPEEIQTVYKILAAILHLGNLKFVVDGDTPLIENGKVVSIIAELLSTK
TDMVEKALLYRTVATGRDIIDKQHTEQEASYGRDAFAKAIYERLFCWIVTRINDIIEV
KNYDTTIHGKNTVIGVLDIYGFEIFDNNSFEQFCINYCNEKLQQLFIQLVLKQEQEEY
QREGIPWKHIDYFNNQIIVDLVEQQHKGIIAILDDACMNVGKVTDEMFLEALNSKLGK
HAHFSSRKLCASDKILEFDRDFRIRHYAGDVVYSVIGFIDKNKDTLFQDFKRLMYNSS
NPVLKNMWPGGKLSITEVTKRPLTAATLFKNSMIALVDNLASKEPYYVRCIKPNDKKS
PQIFDDERCRHQVEYLGLLENVRVRRAGFAFRQTYEKFLHRYKMISEFTWPNHDLPSD
KEAVKKLIERCGFQDDVAYGKTKIFIRTPRTLFTLEELRAQMLIRIVLFLQKVWRGTL
ARMRYKRTKAALTIIRYYRRYKVKSYIHEVARRFHGVKTMRDYGKHVKWPSPPKVLRR
FEEALQTIFNRWRASQLIKSIPASDLPQVRAKVAAVEMLKGQRADLGLQRAWEGNYLA
SKPDTPQTSGTFVPVANELKRKDKYMNVLFSCHVRKVNRFSKVEDRAIFVTDRHLYKM
DPTKQYKVMKTIPLYNLTGLSVSNGKDQLVVFHTKDNKDLIVCLFSKQPTHESRIGEL
VGVLVNHFKSEKRHLQVNVTNPVQCSLHGKKCTVSVETRLNQPQPDFTKNRSGFILSV
PGN"
regulatory 3472..3477
/regulatory_class="polyA_signal_sequence"
polyA_site 3481
BASE COUNT 1016 a 811 c 804 g 869 t
ORIGIN
1 gaagaggcga tcaaaagaca cttgtattgt gatatcaggg gaaagtggag ctggtaaaac
61 ggaagccagt aagtacatta tgcagtatat tgcggccatc accaacccca gtcagagagc
121 agaggttgaa agagtgaaga atatgttgct taagtccaac tgtgttttgg aagcttttgg
181 aaatgccaaa accaaccgta atgacaactc aagcaggttt ggaaaataca tggatatcaa
241 ctttgacttc aagggtgacc ctattggtgg gcatatcaat aactacttac tagaaaagtc
301 tcgagtgatt gtgcaacagc caggagaaag aagctttcat tctttctatc agctactcca
361 aggaggttca gaacaaatgc tacgctctct acatctccag aaatcccttt catcctacaa
421 ctatattcat gtgggagctc aattaaagtc ttctatcaat gatgctgccg aattcagagt
481 tgttgctgat gccatgaaag tcattggctt caaacctgag gagatccaaa cagtgtataa
541 gattttggct gctattctgc acttgggaaa tttaaaattt gtagtagatg gtgacacgcc
601 tcttattgag aatggcaaag tagtatctat catagcagaa ttgctctcta ctaagacaga
661 tatggttgag aaagcccttc tttaccggac tgtggccaca ggccgtgaca tcattgacaa
721 gcagcacaca gaacaagagg ccagctacgg cagagacgcc tttgccaagg caatatatga
781 gcgccttttt tgttggatcg ttactcgcat caatgatatt attgaggtca agaactatga
841 caccacaatc catgggaaaa acactgttat tggtgtcttg gatatctatg gctttgaaat
901 ctttgacaac aacagttttt gaacaattct gtatcaatta ctgcaatgag aaactgcagc
961 agctatttat tcagctggtt ctgaagcaag aacaagagga ataccagcgg gaagggatcc
1021 cctggaaaca tattgactac ttcaacaatc agatcattgt tgacctcgtg gagcaacagc
1081 acaaagggat cattgcaatc cttgatgatg cttgcatgaa tgtcggcaaa gtcaccgatg
1141 aaatgtttct tgaagcactt aacagtaaat tgggcaaaca cgcccatttt tccagccgaa
1201 agctctgtgc ctcagacaaa attctggagt ttgatcgaga ttttcgaatt cgacattatg
1261 caggcgatgt agtctattct gtcattggtt ttattgacaa aaataaagat actttatttc
1321 aagatttcaa gcgccttatg tataacagtt caaatcctgt gctcaagaat atgtggcctg
1381 gaggcaaact gagcattaca gaggtgacca agcgacctct gactgctgct accttgttta
1441 agaattctat gattgctcta gtagacaacc ttgcatcaaa ggaaccatat tacgttcgtt
1501 gcatcaaacc caatgacaag aaatctccac agatatttga tgatgaacgc tgccggcacc
1561 aagtagaata tcttggacta ctggaaaatg tgagagtgcg tcgggcagga tttgccttcc
1621 gccagacata cgagaagttt cttcacaggt ataagatgat ctctgaattc acctggccca
1681 accatgacct tccttcagac aaagaggctg tcaagaaact aattgaacgg tgtggttttc
1741 aggatgatgt agcttatggg aagaccaaaa ttttcattcg aacaccccga acattgttta
1801 ccttggaaga actccgtgcc cagatgctca taaggattgt cctctttcta caaaaggtgt
1861 ggcggggcac cctggcccgc atgcggtaca aaagaaccaa ggcagctctg acaataatca
1921 ggtactaccg gcgctacaaa gtgaagtcgt acatccacga ggtggccaga cgcttccatg
1981 gcgtcaagac catgcgagac tacgggaagc acgtgaagtg gccaagccct cctaaagttc
2041 ttcgccgttt tgaggaggcc ctgcagacga ttttcaatag atggagagca tcccagctca
2101 tcaagagcat tccggcctca gacctgcccc aggtcagggc aaaggttgca gccgtggaaa
2161 tgttgaaggg tcaaagggct gacctcgggc tccagagggc ctgggagggc aactatcttg
2221 cttcaaagcc agatacacct cagacctcag gcacttttgt ccctgttgct aatgaattga
2281 aacggaagga caaatacatg aatgtcctct tttcctgtca cgtccgtaag gtaaatcgat
2341 ttagtaaggt ggaagacaga gcaatttttg tcactgaccg tcacctgtat aaaatggatc
2401 ccactaaaca gtacaaggtg atgaagacta tccctctata caatttgact ggtctgagtg
2461 tctccaatgg aaaggaccaa cttgtagtgt tccatacgaa agacaacaaa gacctcattg
2521 tctgcctctt cagcaaacag ccaacccatg agagtcgaat tggagaactt gttggagtgc
2581 tggtgaatca tttcaagagt gagaagcgcc accttcaagt gaacgtcacc aacccagtac
2641 agtgcagcct gcacgggaag aagtgcaccg tctccgtgga gacgcggctc aaccagcccc
2701 agcccgactt caccaagaat cgctcgggct tcatcctcag cgtgcccggg aactgacgcc
2761 ccgcggaggc ctggcccgga gcccggccac actccgagtc ctgggtccca gtccagctgc
2821 tgcctcccaa cccatgcccg ctagaaacct gctgcgaggg cccctcccag aggagccccg
2881 cccctgtggt cctcttatag atacctgcac aggcagaggt gccctcagcc caggttagca
2941 acactcatag ttttgccaat taccagtaga cactagtgga accatctaac tggaacttcc
3001 tctctccttc cacttatttc ctcaaacttg ttgctttaca ctagacacat gcaaatgtat
3061 gttttaaaca caccaaaaca gatcatgcca aatgagttgc ctgtcaaagg ctggagggca
3121 ggaggagggc ctgggtttgg gttctttcct cccagccttt ggatggtgcc ttgggcccct
3181 tagccccagc gccagggcct cccagctgag gccacaggaa agcacttttt tatgatgtac
3241 taaaagccac agtatgtggc aactgcaaaa ggatcaggaa tttagggtat gatctcggtc
3301 acgtgtcccg ggcgctgagg ggaaaggaag cgggcatgat tgtagacaat gagggggttc
3361 tcttgatgta atgaaatgca attttatggt ttggtgcaaa aactcctatt ttccagtaaa
3421 ttaactttat ttctaaagca tattttgatt tgccatcaag agcaataaag cattaaatct
3481 taaaaaaaaa aaaaaaaaaa
//