LOCUS BV079546 277 bp DNA linear STS 23-JAN-2004 DEFINITION D17Jcs64 Mouse Chromosome 17 genomic sequence Mus musculus STS genomic, sequence tagged site. ACCESSION BV079546 VERSION BV079546.1 KEYWORDS STS. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 277) AUTHORS Bergstrom,D.E., Bergstrom,R.A., Munroe,R.J., Lee,B.K., Browning,V.L., You,Y., Eicher,E.M. and Schimenti,J.C. TITLE Overlapping deletions spanning the proximal two-thirds of the mouse t complex JOURNAL Mamm. Genome 14 (12), 817-829 (2003) PUBMED 14724736 COMMENT Contact: John C. Schimenti John C. Schimenti The Jackson Laboratory 600 Main Street, Bar Harbor, ME 04690, USA Tel: 207-288-6400 Fax: 207-288-6078 Email: jcs@jax.org Primer A: TCAGTGCAGACTACCATGTGC Primer B: GATGTTAAATGTTTTCCCATATTCA STS size: 277 PCR Profile: Presoak: 94 degrees C for 3 minutes Denaturation: 94 degrees C for 30 seconds Annealing: 55 degrees C for 35 seconds Polymerization: 72 degrees C for 30 seconds PCR Cycles: 40 Postsoak: 72 degrees C for 7 minutes Thermal Cycler: MJ Research PTC-100 Protocol: Template: 25-100 ng Primer: 200 nM dNTPs: 200 uM Taq Polymerase: 0.025 units/ul Total Volume: 25 ul Buffer: Tris-HCl: 10 mM pH: 8.3 KCl: 50 mM MgCl2: 1.5 mM gelatin 0.001% (w/v). FEATURES Location/Qualifiers source 1..277 /organism="Mus musculus" /mol_type="genomic DNA" /db_xref="taxon:10090" /clone_lib="Mouse Chromosome 17 genomic sequence" /note="STSs designed from Celera mouse consensus genome sequence from proximal mouse Chromosome 17." STS 1..277 primer_bind 1..21 primer_bind complement(253..277) BASE COUNT 65 a 18 c 76 g 118 t ORIGIN 1 tcagtgcaga ctaccatgtg caagacagga tatctgtatg tatgtgtgtg tgtgtgtgtg 61 tgtgtgtgta ttttgtgtgt attctgtgtg tatatgtgta tgtgtatatg tatgcttata 121 tgtgtgtatg tgtatatatg aatgtaacta tgtgaaggtc tatgtgttta tgtggagtct 181 gtatgagtat gtatgtacat gtgtatatac gtatgtattg tatatgtgta tgtgtgtgta 241 tgtatgtgtg tatgaatatg ggaaaacatt taacatc //