LOCUS BR000706 6613 bp DNA linear PLN 20-OCT-2011
DEFINITION TPA_exp: Oryza sativa Japonica Group OsNAAT5 gene for
nicotianamine aminotransferase homolog, complete cds.
ACCESSION BR000706
VERSION BR000706.1
KEYWORDS Third Party Data; TPA; TPA:experimental.
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 6613)
AUTHORS Inoue,H., Takahashi,M., Kobayashi,T., Suzuki,M., Nakanishi,H.,
Mori,S. and Nishizawa,N.K.
TITLE Direct Submission
JOURNAL Submitted (10-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takanori Kobayashi
The University of Tokyo, Graduate School of Agricultural and Life
Sciences; 1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
REFERENCE 2
AUTHORS Inoue,H., Takahashi,M., Kobayashi,T., Suzuki,M., Nakanishi,H.,
Mori,S. and Nishizawa,N.K.
TITLE Identification and localisation of the rice nicotianamine
aminotransferase gene OsNAAT1 expression suggests the site of
phytosiderophore synthesis in rice
JOURNAL Plant Mol. Biol. 66, 193-203 (2008)
COMMENT
PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-6613 AP008217.1 19695338-19701950 c
FEATURES Location/Qualifiers
source 1..6613
/chromosome="11"
/cultivar="Nipponbare"
/db_xref="taxon:39947"
/mol_type="genomic DNA"
/organism="Oryza sativa Japonica Group"
CDS join(1..57,410..477,3057..3096,3192..3523,4915..5194,
5349..5567,5783..5842,5978..6133,6217..6310,6474..6613)
/codon_start=1
/experiment="RT-PCR"
/gene="OsNAAT5"
/note="Expression level was confirmed by RT-PCR, product
name was presumed by homology analysis."
/product="nicotianamine aminotransferase homolog"
/protein_id="FAA00727.1"
/transl_table=1
/translation="MTCLCLGSKLKESDKVKLMVKLDLSCLHGIKDDMDFCCKLAKFP
IAPILYLHQVQLAQAMEDGSGNGRPPATAAAWNFEPNGALLGLTALSVRGVLGRVKAG
MAAGGGGDGGGGGGRAVIPMGHGDPSVFPCFRTTADAVDAVAAALRSGEHNSYSSCVG
LEPARRSIARYLSRDLPYELSADDVYLTSGCAQAIEIICSVLARPGANILCPRPGYLF
HEARAVFNGMEVRYFDLLPESGWEVDLDGVQELADKNTVAMVAETAKKLGIFVIADEV
YAHLTFGQNKFVPMGVFGSVAPVLTLGSISKRWVVPGWRLGWIVTSDPNGVFQRTKVV
ESIQSYLDISADPATFIQGAIPQLIENTKEEFFEKTVDVLRQTADICWEKLKGISCIT
CPSKPEGSMFVMVKLDLSCLQGIKDDMDFCCQLAKEELVILLPGCAVGYKNWLRITFA
IEPSSLEDGIDRLKSFCSRHSKPKVHRSLET"
BASE COUNT 1934 a 1298 c 1322 g 2059 t
ORIGIN
1 atgacctgtc tgtgtttggg cagcaagtta aaagagtctg acaaagttaa gctcatggta
61 tgaacttcac aaagttcacc atacatgttt tctgttaaca atcctggtac agagttacct
121 taccatgact agattaacat cttacaattc aagttgaatt tcaggtcaat tggtactcat
181 cacaaaactt gccatatgag ctatctgctg atgatgtcta cctgacaaag tggctgtgca
241 caagcaattg agatcatctg ctctgtccta gctctgcctg gtgccaacat cctgcgccca
301 aggctgggct aaacctgagg gttccatgtt tgtcaaatat gctgcttcat aatacagaga
361 atcgaaggga atttctcacg gtggatgatg tttggttggc ttggtgaagg tgaaactgga
421 tctgtcctgc ctgcatggca tcaaagatga catggatttc tgctgcaagc tggcaaagta
481 agaatgtgtg gttcttttgc caggtagtac aatcctgatt cctcccatac acatgattta
541 acttgtaaaa ttctagctca cctcatctgt ttggttcaat atgttttatt tccacaatga
601 taagtgattc agagttgcct tcagtttgaa atattaacac gtttgcaaaa gaaaattgta
661 tttcttaaaa aagtggataa atatgtgata tatcaccaca atcatacaag ttcatattca
721 acttagtata cgaccgaaaa aaaaatttga ctataaataa tacgcactat ttacaaattt
781 gttatttaca gtcaaacttt ttggcgacaa acacaagcac agtgggatgt atcttcgagt
841 gacgaaaatc tgcctcccta gaaagttctt ttttttccta tcacttagca gcaggctcat
901 ttgcagcgtt aagagatgtg tgtgctctgg cctcttgggg tctccggctg gcttggttct
961 aaaagtttca atcagccggt attttttagt ctttcatgtt gttgaggtca cacaaaatgg
1021 tgggatggca tcatttcaat tttcaagtgc gatctgcatg gatcttgtgt tatatgtgct
1081 gaatactctg taatccagaa ggtttcccac tttccctgct cttctgtttc aaaataaaat
1141 cttgctacct ctattttttt taatatataa caccgttatc attttatact gtgtttgacc
1201 atttgtttta ttcacaaaat tgaagtaaat atcttttctt ttgttgtggc ttgatgtatc
1261 actaaaggaa ttttaagtac cttatatttt taagatttgc atatcttttt taataatgca
1321 gttaaatatt ataataaaag tcaacagcgt catatattaa ataacaggag aagtacttat
1381 tttcacaact ttatgcatta ttggtctata gtcttttttt tttcgtgcgt gcacaccatt
1441 caattagtag gaagcaaacg agtttacaca ggacgaacgt cagaagcgca tgcagtatgg
1501 agaaaaatat cccaagagga ttaaaaaaaa acctaatctc ccaaacaggc tcctaagagt
1561 gatgcacccg ccaagatcca ccgcctccta catgatttga tgaacgatga cagaaacaaa
1621 gtaaagggtt tctcttgaaa acctcctgat gttgtgttcc ttcccggccc gtttggttgg
1681 ggggagtttt tagtagggat taggagttta gatggatgag cctatttact gttttgtttg
1741 gttgtgagac atgtgaattt tggtgggata gtgatggtga attgagaaat aaactccctc
1801 cttttcaata cctgggcagg ggtggtaatt gggagggaat tcctccttta cttcgcataa
1861 acaaatctca gccatccatt ttcattaata atctaatctc caactaatct ctctatcaat
1921 ttccaccacc tctaccaaac aagagactgg gatgaaaaat caaattccca tcttaatctc
1981 accatcaatt ccttcgtgta aactcccaat ccccttccct cgagttgcca aacaagccgt
2041 ccaaagctat cgagagatga gcaggagcga accacaatga cgcaacacat atatctattc
2101 gtgtcacaaa ctttacattt cataccactt aaaaaagtat taatatgatt ttttaagcaa
2161 ctttttatag aaagtttttt taaatatata caatatttag caattcggga aacgtgtgtt
2221 tagaaaataa tattcttttt tcttctcttt gttcaactct caaaccgcct aaaacttctc
2281 tctccgtatc acgatcgcca gatatatcac acgtcatgcg tggattctac acgtggagag
2341 ccacgtcagc gctgatgcaa gcgcttatgt cgtcgtacgt gctagctctt ggcatatatc
2401 gatcgtcgtc aattaattat catatgaatt ctggctctcg atcgatttag tggcaactac
2461 tccaaagcga gctagtcaaa taatcaagtc aaatctgccc tctttgatga tgtaactccg
2521 gattgtctct ctgccattgc ttgtcgattt gcaggttaat gaaacaaact attctaattt
2581 ggctttgttc atgtttttga acaaacaaag gaagtctgtc tttgcttatt gctggaagta
2641 tcactcgatc cgttttcaaa tatctatcgt tgttgtatat tattgtttca attttgacgg
2701 taaattattc ttaaatggtt agattagact aacaggaatt ccatgcttac attaggaatc
2761 caatacgctg aaaatatgat acccatttta caagacgttt tgatctcttt atccttcatc
2821 cttaaacaca tatataaatc catgcatgaa tttattcaaa tcctaaagcg tatttgtaac
2881 ttgaatcaga gaaagtatct ttttaggtgt ttgcaaatct tttttttttt tttaaaaaaa
2941 gacgagcagt taaagtttaa agaaaataat ggcaggtgac aggctagtat ttgaaaatga
3001 agtgagtacc agcacaattt gcatttgttt tttcaaattt ttttttgttt atatagattc
3061 cccattgccc ccatcctcta cctgcatcaa gtacaagtga accttgagct tcagactttt
3121 tcctacatca aatcctacta tttgtcacca ctcaaaataa acattttttt tcaaaaaaaa
3181 aaaatccgaa gctggcgcaa gcaatggagg acggctccgg caacgggcgg ccgccggcca
3241 ccgcggcggc gtggaacttc gagccgaacg gcgcgctgct cgggctgacg gcgctgtcgg
3301 tgcgcggcgt gctgggcagg gtcaaggccg ggatggcggc gggcggcggc ggagatggtg
3361 gtggtggtgg tgggcgggcg gtgatcccga tgggacacgg cgacccgtcg gtgttcccgt
3421 gcttccggac gacggcggac gccgtggacg ccgtggcggc ggcgctccgg tccggggagc
3481 acaactccta ctcctcctgc gtcggcctcg agcctgcacg gaggtcagaa aatcgccatc
3541 aattactctc tcagccccat cggtttcatt tcataataag ctaaaatggg ttattaggga
3601 gtactccctc cttccctaaa tgtttaccgc cgttgacttt tttaaacatg tttgacattt
3661 cgtcttattc aaaaactttt gtgaaatatg taaaactata gtatacataa aagtatattt
3721 aacaataaat caaatgataa gaaaagaatt aataattact taattttttt tgaataagac
3781 aaatggtcaa acatgtttaa aaaagtcaac ggcgtcaaat atttagggat gtagggagta
3841 caaattaatt tgtaggtaaa acttttgtat atgtgttcta aggttgtgtt tggaggtaac
3901 ccatgcctcc cgacacgcaa aacgatgtaa tagtttagca tataattaat tacgtattag
3961 ctgaaaaaac tttaaaaaat agattatgat gattttttaa agcaactttc ttattggaaa
4021 tttttttaaa aaaatatacc gtttagcagt ttgggaagcg tgcgcgtgga taataaagta
4081 ggggaagttg ggaacttaca taaacacaac ataagcaact taaaaaccaa tgcaaaaaaa
4141 gtaagttaaa aatatcttag aatcaacttc agaattaaat ttaaaattta aattttggct
4201 ttgactttgg tttattaggc caaccgatgg tgccctctct aattagcacc tgttcatgct
4261 gcaaatgttg ctgtattaat ccgcttctaa aattctttct tttctattct acatggtaaa
4321 gatgaaattt ccttagaatt taccttacgg gatgaaaaaa gatcaaagct ttgcgttttg
4381 ttcattctga acaaattgac caaatcagcg gaaaacaatg atctttaggc aaaaacaatt
4441 ttggacatca actggtttgg ctgtccataa aaagggagca atggtactgg atttgtcaaa
4501 tgattaggtt gttcaggcat gatataaacc actggtggcc tcacactgtg tgaccactaa
4561 ctgacaacag aatcactatg gagtaagcat aacaaacctg acagattact gtggagtaag
4621 tgcatatggt ccaccctaaa tttcaactat gggttatata agacttaaaa gtgatcatgt
4681 ggtccactct gaaatttcag agtggctgaa tttgtactct taagtcttaa cacacaatcc
4741 tcaatcatga catctgtgtc taggcagcaa atttaaagag tctgacaaaa tttaggctca
4801 catagtgttg atttcacaaa gatcaatgta cctgttttac tgttcacaat cctggcacat
4861 atcttcctca ccatagctag acataaaaat cctaaaactg aagttgaatt ccaggtctat
4921 cgcgcggtac ttatcgcgag acttgccata tgagctatca gctgatgatg tgtacctgac
4981 aagtggctgt gctcaagcga ttgagatcat ctgctctgtc ctagctcgcc ctggtgccaa
5041 catcctgtgc ccaaggccag ggtacctgtt ccacgaggca cgcgcagtgt tcaatggcat
5101 ggaggtcagg tactttgatc ttctcccaga gagtggctgg gaggttgatc ttgatggagt
5161 gcaggaactt gctgacaaga acacggttgc aatggtcatt atcaatccag gaaatccctg
5221 tggcaatgtc tacacttctg agcatttggc caaggcaagt actgagttaa ttagtcattt
5281 ctttcctact ggggatcatt ttgggggaaa tttcagtgtg tttgatcaag gatcagtgtt
5341 tcttgtaggt tgccgagacc gcgaaaaagc ttggcatctt tgtcattgca gatgaagtgt
5401 atgcacattt gacgtttggg cagaataaat ttgtgccgat gggggtgttt ggctcagtag
5461 ctccagttct tacgttagga tcgatatcga agagatgggt tgtgcctgga tggcgacttg
5521 gatggattgt gacgagcgat cctaatggcg tatttcaaag gaccaaggtt gtttaagttt
5581 aacttcaaac ccttttcata caagtattgt tgcaatcaac aacaaaaatc aaggatattt
5641 gtagtttatt caacaaagaa tgcagatatt gcagactagc agcaatctaa gcttaatgaa
5701 atagcttcca ctttttggta ttatctgaaa cctaaccctt ggaaacggtc aaacaactct
5761 tagccttgat cccccttttc aggtagtgga aagcatccag agttaccttg atatctcggc
5821 tgatcctgca acatttatcc aggtaactaa aattgcctga tcacatctct tctaaagata
5881 aattgtacat aacttggcag aataaaaaga tcagtggaga tacataatat caaaacataa
5941 tgatttacat tctaccttga ttaatttttt ttttcaggga gcaattccac aactcataga
6001 gaacacaaag gaagaattct tcgaaaagac cgtcgatgtc ctaaggcaga ccgcagatat
6061 ttgttgggag aagctgaagg gcatcagttg catcacttgc ccaagcaaac ctgagggttc
6121 catgtttgtc atggtcagtc aaatattctg cttcacaatg aagagaatca aagggaattt
6181 ctgatggtgt atgatgtttt ggttggcttg gtgcaggtga aactggatct gtcctgcctg
6241 caaggcatca aagatgacat ggacttctgc tgccagctag caaaggaaga attggtgatt
6301 cttttgccag gtacattcct gaatcctgat tcctcccatg cacatcattt aactttcaaa
6361 attctagctc attccatctg ttcggtacaa tttgttttgt ctctacaatg atcagtgatt
6421 cagaattgcc ttctgtttga aatattaaca acttggtaaa aaaaattgtc caggatgtgc
6481 tgttggatac aagaattggc tccgaatcac cttcgccatc gaaccgtctt ctcttgaaga
6541 tggtattgat aggctcaagt ccttctgctc gcgacatagc aagccgaaag ttcaccggtc
6601 tcttgaaaca tga
//