LOCUS       BN000835                2985 bp    mRNA    linear   PLN 01-MAY-2007
DEFINITION  TPA: Oryza sativa (japonica cultivar-group) mRNA for putative
            cation chloride cotransporter 2 (ccc2 gene).
ACCESSION   BN000835
VERSION     BN000835.1
KEYWORDS    cation chloride cotransporter 2; ccc2 gene; Os01g19850 gene; Third
            Party Data; TPA; TPA:inferential.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2985)
  AUTHORS   Colmenero-Flores J.M.
  JOURNAL   Submitted (20-OCT-2005) to the INSDC. Colmenero-Flores J.M.,
            Genomics, Instituto Investigaciones Agrarias, IVIA, Apartado
            Oficial, Moncada, Valencia, 46113, SPAIN.
REFERENCE   2
  AUTHORS   Colmenero-Flores J.M., Martinez G., Gamba G., Vazquez N.,
            Iglesias D.J., Brumos J., Talon M.
  TITLE     Identification and functional characterization of cation-chloride
            cotransporters in plants
  JOURNAL   Plant J. 50(2), 278-292(2007).
   PUBMED   17355435
PRIMARY     TPA_SPAN            PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-173               AP008207.1         11264094-11264266   c
            174-320             AP008207.1         11262283-11262429   c
            321-399             AP008207.1         11262074-11262152   c
            400-491             AP008207.1         11258384-11258475   c
            492-606             AP008207.1         11257766-11257880   c
            607-707             AP008207.1         11257434-11257534   c
            708-769             AP008207.1         11256831-11256892   c
            770-1018            AP008207.1         11255713-11255961   c
            1019-1133           AP008207.1         11255511-11255625   c
            1134-1328           AP008207.1         11255195-11255389   c
            1329-1729           AP008207.1         11253977-11254377   c
            1730-1891           AP008207.1         11253398-11253559   c
            1892-2985           AP008207.1         11252220-11253313   c
FEATURES             Location/Qualifiers
     source          1..2985
                     /organism="Oryza sativa Japonica Group"
                     /chromosome="1"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
     CDS             1..2985
                     /gene="ccc2"
                     /gene_synonym="Os01g19850"
                     /product="putative cation chloride cotransporter 2"
                     /db_xref="GOA:Q657W3"
                     /db_xref="InterPro:IPR004841"
                     /db_xref="InterPro:IPR018491"
                     /db_xref="UniProtKB/Swiss-Prot:Q657W3"
                     /protein_id="CAJ40614.1"
                     /translation="MERGGFGGAGRHDEEAPAMRPAPQQRYRTVESHDRAVVQMAPME
                     FGSSADASASAGPRYIKPGTNLRTDARMHMASSNGRSSNGSQGDSKLELFGFDSLVNI
                     LGLKRMVGEQAQASASTRDGENAGIAIGHPKETETKLDTMMGVFVPCLQNILGIIYYI
                     RFTWIVGMGGVWQSLVLVAFCGSCTFLTTISLSAIATNGAMKGGGPYYLIGRALGPEV
                     GVSIGLCFFLGNAVAGAMYVLGAVETFLDAVPSAEFFQESVTVVTNTFVNGTAAGNAT
                     TISTPNLHDLQVYGIIVTILLCFIVFGGVKIINKVAPAFLIPVLFSILCIYIGVFIAP
                     RPNASKWITGLSITTLKDNWSSDYQRTNNAGVPDPNGSIYWDFNALLGLYFPAVTGIM
                     AGSNRSASLKDTQRSIPIGTLHATISTTMMYLLSVFLFGALSTREGLLTDRLLCAAVA
                     WPSPAVVYAGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKAYEGSEPHVATL
                     FTSFICISCVIIGNLDVITPTITMFFLLCYAGVNLSCFLLDLLDAPSWRPRWKLHHWS
                     LSLIGALLCIVIMFMISWTFTVVSLALASLIYYYVSLKGKAGDWGDGFKSAYFQLALR
                     SLRSMGANQVHPKNWYPIPLIFCRPWGKLPEDVPCHPKLADFANCMKKKGRGMSIFVS
                     IIDGDYHESAEDAKTACRQLSAYIDYRRCEGVAEIIVAPSTSIGFRSIVQTMGLGNLK
                     PNIVVMRYPEIWRRENLTQIPSTFVSIINDCITANKAVVIVKGLDEWPNEYQRQYGTI
                     DLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDTEAEELKADVKKFLYDLRM
                     QADVIVVTVKSWEADPDRSGGSKKDDPEVYRSAQSRIRTYISQLKEAAERERRPLMEG
                     GKQVVVDEQKVEKFLYTMLKLNATILRHSRMAVVVLVSLPPPPLNHLAYCYMEYMDLL
                     VENIPRILIVRGYRRDVVTLFT"
BASE COUNT          752 a          663 c          749 g          821 t
ORIGIN      
        1 atggagagag ggggattcgg cggggccggc cgccatgacg aggaggcccc ggcgatgagg
       61 ccggcgccgc agcagcggta ccgcacggtg gagtcgcacg accgcgccgt cgtccagatg
      121 gcgcccatgg agttcggatc ttccgccgat gcctccgcct ccgcagggcc caggtacatc
      181 aagcctggaa ctaacctacg cactgatgca agaatgcata tggcttcttc taatgggcgt
      241 agctctaatg gatctcaagg cgattcaaaa cttgagctgt ttggttttga ctctctggtc
      301 aatattttgg gacttaagag aatggtaggc gaacaagctc aggcatctgc tagtactagg
      361 gatggagaaa atgcagggat tgccattgga caccccaagg aaactgaaac taaacttgat
      421 accatgatgg gtgtattcgt gccatgcctg cagaacatct tgggaataat ctattatatt
      481 cgctttactt ggatcgttgg tatgggaggc gtatggcagt cacttgtttt agtcgcattt
      541 tgtggttcat gcacattttt aactacgata tcattaagtg caattgcgac gaatggggcg
      601 atgaagggtg gtggccctta ctatctcatt ggcagggcac ttggtccgga agttggagtt
      661 agtattggat tgtgtttctt ccttgggaat gcagttgccg gagctatgta tgtgctggga
      721 gctgtcgaaa cctttttgga tgctgttcct tctgctgaat tttttcaaga gagtgtaaca
      781 gtggtcacca atacgttcgt aaacggtacc gcagcaggca atgcaacaac tatctcaaca
      841 cccaacttgc atgacctcca ggtctacggc atcatcgtga ccatattgct ttgttttatt
      901 gtatttggtg gcgtcaaaat tatcaacaaa gttgcacctg ctttcttaat accagtgctc
      961 ttctcaatcc tgtgcattta catcggtgtc tttattgcac caaggccaaa tgcttcaaag
     1021 tggataactg gtttgagtat aactacattg aaagacaact ggagttcaga ctaccaacga
     1081 acaaacaatg ctggagttcc tgatccaaat gggtctatat attgggattt taatgctttg
     1141 ttaggtctct acttcccagc agttacagga atcatggctg gttcaaatcg gtctgcttca
     1201 ctgaaagaca cacaacgttc aataccaatt ggaacattac atgctaccat ttcaactact
     1261 atgatgtatc tactatctgt gtttctgttc ggagcattgt ctacaagaga ggggcttctg
     1321 actgacaggc ttctatgtgc tgcagttgct tggccctctc cagcagtagt ttatgctggt
     1381 ataattctat ccactttagg tgcagcgcta cagagtctga caggggctcc aaggttactt
     1441 gcagcaatag cgaatgatga cattcttcct gtacttaatt attttaaggc ttatgaaggg
     1501 tctgaacctc atgtggcaac tctgtttaca agcttcatct gtattagctg tgtcatcatt
     1561 gggaacttgg atgtaattac acccactatc accatgtttt tccttctgtg ttatgctggt
     1621 gtgaacttgt catgctttct gcttgacctc cttgatgctc ctagttggcg cccccgatgg
     1681 aagttgcacc actggagcct ttctctcatc ggtgcattgc tttgtattgt tatcatgttt
     1741 atgatctctt ggacttttac tgtggtctcc cttgcccttg caagcctcat atactactat
     1801 gtcagcttaa aaggaaaggc aggggactgg ggggacggat ttaagagtgc atactttcaa
     1861 ctggctctaa gaagtcttcg atcaatggga gcaaatcaag ttcatcctaa gaattggtac
     1921 cctattcctc tcatattttg tcggccttgg ggtaaacttc cagaagatgt cccgtgccat
     1981 ccaaaactcg cggattttgc caactgcatg aagaaaaagg gccgtggtat gtcaatattt
     2041 gtctcaatta ttgatggcga ctatcatgaa tctgctgagg atgcaaagac agcatgccgc
     2101 caactgagcg cttatattga ctataggcgc tgtgagggcg ttgcagagat tatcgtagca
     2161 ccctcaacat ctatcggttt tcgcagcatt gttcagacaa tgggcctagg gaatttgaaa
     2221 ccaaacattg ttgtgatgcg gtacccagaa atctggcgtc gtgagaatct gacacagata
     2281 ccatcaacat ttgtcagcat cataaacgat tgcattactg ctaacaaggc tgtcgtcatt
     2341 gtgaaaggac tagatgaatg gcctaatgag taccaacgac agtacgggac aatcgaccta
     2401 tactggattg tgagggatgg aggattgatg ctccttctgt ctcagctcct actcaccaaa
     2461 gaaagcttcg agagctgcaa gattcaggtc ttctgcatag ctgaagaaga taccgaggcc
     2521 gaggagctaa aggcagacgt caaaaagttc ttgtacgatc ttaggatgca agctgatgtg
     2581 atcgttgtga ctgtgaagtc atgggaagca gacccagatc gcagcggtgg ctcgaagaag
     2641 gatgaccctg aggtgtacag aagcgcgcag agcagaatca gaacatacat ttctcagctg
     2701 aaggaagccg cggaacgcga acgccggccc ctgatggagg gtggcaagca ggtcgtggtt
     2761 gatgaacaga aggttgaaaa gttcctctac acgatgctga agctgaacgc tactatcctt
     2821 aggcactcca ggatggcagt cgtggtgctc gtgagccttc caccgccacc actgaaccac
     2881 ctggcatact gctacatgga gtacatggat ctgcttgtag agaacatccc gaggatcctg
     2941 atagttaggg gatacagaag agatgtcgtc acgcttttca catga
//