LOCUS BG087133 614 bp mRNA linear EST 12-MAY-2010 DEFINITION H3135H09-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3135H09 5', mRNA sequence. ACCESSION BG087133 VERSION BG087133.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 614) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG087133.1. Other_ESTs: H3135H09-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3135 row: H column: 09 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..614 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3135H09-5" /db_xref="taxon:10090" /clone="H3135H09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 191 a 112 c 144 g 167 t ORIGIN 1 atacattttt gaaagcaact cagaaggaga aaagatatgc tatgctatta atttggggaa 61 agaaattatt gaggttcaaa aggatccaga agcactggct cgattaatgc tgtctgtacc 121 actaaccaat gatggaaagt atgtactgtt aaacgatcaa gcagatgaca ctggcggaag 181 tccaagtgaa aacagaggcg cagaatctga agcataactc atttgggcat cgggggtcag 241 agcacgtggg aaggagagcc actccttaag cagttttcaa cttctctgcc gtacaggcac 301 agtgacctga atttagaaca ccgacaacca cgtgcggagt gtacccttgg atgccctggc 361 acagaaactt gggagggaga caataagaaa tgggtgagag cgtgcctata ctctacaaat 421 gctattttag gtgctttgtg gtaagtcttt gcttcagact gttgggtacc cagaacgaga 481 gctataaaaa tgcattgttc actttatttg gatagcagcg cttcagttcc taggatcctt 541 ttataaatgg taaaaccctg gatttacaat ttgttaaata ctaaatagtt cctattaata 601 tgatctattt ttgt //