LOCUS BG087032 683 bp mRNA linear EST 12-MAY-2010 DEFINITION H3134A12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3134A12 5', mRNA sequence. ACCESSION BG087032 VERSION BG087032.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 683) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG087032.1. Other_ESTs: H3134A12-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3134 row: A column: 12 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..683 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3134A12-5" /db_xref="taxon:10090" /clone="H3134A12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 172 a 163 c 185 g 163 t ORIGIN 1 agcccaccag ccacggccac tgccttgtct atgccaggct tccctcctcc cataggatca 61 gctccgaccc atacacctag attccagggt gcccttccct cctgactttc tcatccccac 121 tttcttacca tgctaagtaa ctggtagctc ccttagcgtt tctctactgt agggattttt 181 ggaaatagaa ggcagaggct attggaagtc ccatgtgcct tttatctttt ttttatagcc 241 taaactctaa agaaagacta gcatgtgagc ctagaagaag gagacaatga gaacgatgct 301 gttgaaggca gaaaggagaa aaagatggaa ggggagatgc tggttggttc attgggagga 361 gcacagaaga aagagctatg tggacctggg aagatttggg tatgcgcagg ttccactgta 421 ggacctggat ggtgatggca agccttgaga gacagggaga cccctaggcg ccatggtctg 481 cttcaccaga ttttctgtct gagtgtcagg ggccttttgg tttatggaag acaagaccct 541 ggccagctca gcggaatcca ttgcagaaat cagtttcgag ggttgtgtgc actgagggcc 601 gtgacctgcc ctaaggagac agtcccagta acagcaaagt ctcctgccag cagtgagaca 661 ggagctcaga gtcagccgta atc //