LOCUS BG081232 660 bp mRNA linear EST 12-MAY-2010 DEFINITION H3062G08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3062G08 5', mRNA sequence. ACCESSION BG081232 VERSION BG081232.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 660) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG081232.1. Other_ESTs: H3062G08-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3062 row: G column: 08 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..660 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3062G08-5" /db_xref="taxon:10090" /clone="H3062G08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 194 a 126 c 127 g 213 t ORIGIN 1 cacaaatata ttttagtata ttcccataac aagattaagt acatagtgaa ggaaagaatg 61 accacacacc ggtaagctca gaaactgata aagggagatt ttattccata tactttgtgt 121 tcctttacaa cagatacata tttatggatt atataaattc atttttagaa agcctaatgg 181 gtatcagtca aaacaaactt tctatcattg tctgcaaatt aatcagacct attatttaaa 241 gttctaaagt cttgtcaaat actttctaat tttcctgttc tgcctgccct gttcattgta 301 atccaccttc ctcataattc cagtttggca tattagtaaa atgtggataa tgtcctttgt 361 atccaacaaa tgagtatgca ctgcagcaat ggacactttg tattgctatt tccctgcact 421 cactggagaa gttgttttag gttgtccttg gttgctcaac agaagactct ggagtctaaa 481 tatgtagggc tggggatgta gctcagttgt tagagtgctt gcctagcaca cacaaagccc 541 tgggtttggt cctcagcact gtgtaatcca agcctaggta gtgggctgag aaattcaagg 601 ttgtccttgg atacctaatt tgaggccagc ttgggctata ggacgacaag ctgtctcaaa //