LOCUS BG081171 581 bp mRNA linear EST 12-MAY-2010 DEFINITION H3061H08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3061H08 5', mRNA sequence. ACCESSION BG081171 VERSION BG081171.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 581) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG081171.1. Other_ESTs: H3061H08-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3061 row: H column: 08 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..581 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3061H08-5" /db_xref="taxon:10090" /clone="H3061H08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 161 a 136 c 119 g 165 t ORIGIN 1 tctagaagca tgttttaaat ccagtaggtt ctccttttac gagactgttc tctatattaa 61 atttccaagc acaaccaatg acttttccaa tgtcttttca atgtctagct tgtgccctct 121 cataaaaatc tgctcattgg tccatactgg agtttcctaa ttttcttagt cattagcaca 181 gagtgtctag ccacataggg agatctcctc gtcctgtatt tccctatatg gaaacgtttt 241 acttcactat tggaagcgca ttgccagctg ttagcaatgt cttctgtgcg agcacaatgc 301 aaatctaaac agcccaatgg gaggcactgt catgaaatta caatgctccc agactggagt 361 ggagaagcag cgcactccct tcaaacaatt taccaagtgg gcactggaag gagacacagg 421 aacagaagtc atccaaagaa cacggtactt ttttgtaaat atactttctg attggtccct 481 gggcacaagg aagatggcgg aatcatgtct tcccaggaga atgtcgcaga tgtccaaggt 541 ccttacactg agctggagaa tggaacgacc tgctttccac c //