LOCUS BG079147 628 bp mRNA linear EST 12-MAY-2010 DEFINITION H3036D03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3036D03 5', mRNA sequence. ACCESSION BG079147 VERSION BG079147.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 628) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG079147.1. Other_ESTs: H3036D03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3036 row: D column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..628 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3036D03-5" /db_xref="taxon:10090" /clone="H3036D03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 161 a 133 c 133 g 201 t ORIGIN 1 tcagaagaca gcttggagga attggttctc tccttctacc ttgtggcctc cagaggttga 61 acttaggtca tcagtcttgg tgaaaagtgc ttttacccaa taagctggct caccagcttc 121 cctacttgta tcaactgaga caacctataa acttacatct gcagtctgaa tcacctcatt 181 gtttgctaat cctttctcca ggggttaggc actctgtcac ttattatcta cagtattact 241 gtgaatattg tgaaacactt tgccttctga attatgttct tggtctttat tttcacatga 301 gtccaagagg atagaggaat cactccaaaa atccactatc tcgggtcact acctacttga 361 tgatctttgc ttgtgacatg tgttagagat ttaagtctat cagtaactgt gtcattgact 421 gtattctaac ctcccagggt ttatgagtgt aacaaacgct gcaattgtga cccaaacatg 481 tgcacaaatc ggttggtgca gcatggtctg caggttcgac tacagctgtt taagacacag 541 aacaagggct ggggtatccg ctgcttggat gatattgcca aaggctcttt tgtctgcatt 601 tatgcaggtt agtgattaaa aaaggggt //