LOCUS BG079031 662 bp mRNA linear EST 12-MAY-2010 DEFINITION H3035A03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3035A03 5', mRNA sequence. ACCESSION BG079031 VERSION BG079031.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 662) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG079031.1. Other_ESTs: H3035A03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3035 row: A column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..662 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3035A03-5" /db_xref="taxon:10090" /clone="H3035A03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 238 a 136 c 156 g 132 t ORIGIN 1 accgacacat gtaaagaaga caagatggta ggactgggga gtactaaaaa ccaagttgcc 61 tgacattaag gagaaaaaaa atggagacac caattaaaag gatttaccac tttcagccag 121 aaccagaaca gtctgtatta acactgggag agctatccag gaggcatcca gagaggatta 181 ttctcaaggg agagactatc acagtcacca gggtttcacg agaatgtttt atagcaaaag 241 aggcattcaa aagctactca aaaaacaaga caccaaagtg tgactgaaga attctaacca 301 aaccgacttc caaggaaaag gccatagact atgctgagca cagcatacaa atgcttgagg 361 attacagtct cacaaactcc acagaggaag ctctggcaca gtggttcgca aacctgtggg 421 ttaacgcaaa ccaccctttc atagggatca cacagcagat atttacatta caattcataa 481 cagtagcaaa attagttatg attagcaagg ggaagttctg actggaggtc acaactgtat 541 tctgaggaac catatgtcag agggtcgcag cattaagcag gctgaggaag cactcctcta 601 aggagacttg agcaagcggg aacagggaca gttcctgatg agcaggaagt gtaatgcacc 661 cg //