LOCUS BG077583 602 bp mRNA linear EST 12-MAY-2010 DEFINITION H3017B06-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3017B06 5', mRNA sequence. ACCESSION BG077583 VERSION BG077583.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 602) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG077583.1. Other_ESTs: H3017B06-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3017 row: B column: 06 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..602 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3017B06-5" /db_xref="taxon:10090" /clone="H3017B06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 179 a 108 c 128 g 187 t ORIGIN 1 cggatttgta aacctcagag tgaggttctg cctgccggag gccgcagtgg tgcggagacc 61 cccgggtgaa tccacgtcac catgtctgac caggaggcaa aaccttcaac tgaggactta 121 ggcgataaga aggattgaga atacattaaa ctcaaagtta ttggacagga tagcagtgag 181 atacatttca aagtgaaaat gacaacacat ctcaagaaac tcaaagaatc atactgtcaa 241 agacagggag ttccaatgaa ttcactcagg tttctctttg aaggtcagag aattgctgat 301 aatcatactc cgaaagaact gggaatggag gaagaagatg tgattgaagt ttatcaggaa 361 caaacggggg gtcactcgac ggtttagata attcttttta ttttttattt ttcctttccc 421 tcaatccttt tttattttta aaaatagttc ttttgtaatg tggtgttcaa aatgaaaatt 481 gaatactggc actccatctc ttagaacata tgaattctag tgttcaatat tcattattgg 541 ttgtttttgt tgtgctgatt tttggtgatc agacctcagc tcccttaata ctgccctttt 601 ta //