LOCUS BG076850 645 bp mRNA linear EST 12-MAY-2010 DEFINITION H3006H09-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3006H09 5', mRNA sequence. ACCESSION BG076850 VERSION BG076850.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 645) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076850.1. Other_ESTs: H3006H09-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3006 row: H column: 09 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..645 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3006H09-5" /db_xref="taxon:10090" /clone="H3006H09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 159 a 167 c 177 g 142 t ORIGIN 1 ctccgagtac tttaaggagt tggaggagga gagcatccga gacaactttg tcatcatcta 61 cgagctgcta gatgagctca tggactttgg ctacccgcag accactgaca gcaagatctt 121 gcgggagtac atcactcagg aaggccacaa gctggaaacg ggggccccta ggcccccagc 181 cacagtcacc aatgctgtgt cctggcgttc agaaggcatc aagtatcgga agaatgaagt 241 attcctggat gtcattgagg ctgttaacct cttggtcagt gccaatggca acgtgctgcg 301 cagtgagatt gtgggttcca tcaagatgcg ggtcttcctc tcaggcatgc ctgagttacg 361 cctgggtctc aatgacaagg tcctcttcga caacacaggc cgagggaaga gcaagtcagt 421 ggagctggag gatgtgaaat tccaccagtg tgtgcggctg tcacgttttg agaacgaccg 481 cactatctcc ttcatcccac ccgacggaga gtttgaactc atgtcctacc gcctcaacac 541 ccatgtgaag cctttgatct ggattgagtc cgtgattgag aagcattccc acagccgcat 601 tgagtacatg gtcaaggcca agagccagtt caagaggcgg tcaac //