LOCUS BG076659 569 bp mRNA linear EST 12-MAY-2010 DEFINITION H3004C03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3004C03 5', mRNA sequence. ACCESSION BG076659 VERSION BG076659.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 569) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076659.1. Other_ESTs: H3004C03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3004 row: C column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..569 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3004C03-5" /db_xref="taxon:10090" /clone="H3004C03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 124 a 110 c 163 g 172 t ORIGIN 1 ggggggcttg tggagtagtt ggtaatagtg aggggttcct cacgtcactg gaagtgggtt 61 ctgagttgct ggagaaagta gaaagatgaa tgtttttaaa tgaaagtgtg tgtggggtgt 121 gtgtgtgtgt gtgtgtgtgt gtgtgtgtga gtgactgtgc tcctggaaca gcacctggga 181 agtctctagt cttctctgag gattttgacc agtaggctac cacagaaaga gttcggtatg 241 gtgaagcctg gtatttcaag tggtgcttgg gaaggagcct ggctcggtgt ccactgttca 301 acaccttgcc tccagccaca gtcctcagtt tcatttttac agccttctct cttccgtgct 361 tctgggaaag ttaacattgg gccctgtttt ggaagtaacc aaggtttaac ccactaaagt 421 ttcacgtgct ccttgctact gagattggtt caagttgtct taaacttaag acatgtccca 481 agccaaactg cagagtcagc aagccatgat tctgggtatt tgcatattgt ggaggctgag 541 caaggggctc tgtactctcc caaactact //