LOCUS BG076315 762 bp mRNA linear EST 12-MAY-2010 DEFINITION H3158C04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3158C04 3', mRNA sequence. ACCESSION BG076315 VERSION BG076315.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 762) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076315.1. Other_ESTs: H3158C04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3158 row: C column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..762 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3158C04-3" /db_xref="taxon:10090" /clone="H3158C04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 261 a 125 c 149 g 227 t ORIGIN 1 gttaacagca actttattat tccactgatg aaaaagttgt agttgtgatg catttcacat 61 aaatttacaa tagtggaggt tatacataaa ttacattaag tcacaaaatt tctattttat 121 agaatcaaat tactttgatg tatccagata atggcatagt tcttaatgga tagctgagtc 181 caaatatgca aaatatagct tctgcttctg accatggtgc tttaaaattc ttcaacatgc 241 attaatatat tctagttgta gggaatatat tacacatagg ctttatcttg cattcaggga 301 aagcccacgc tgaatttcac gcacagtact cctgtcctct aaagtaatct cacataggac 361 cagagaacga agaaacaagt atgtttgggt tagtattcct cattaatgaa gaaaatacac 421 aatcaacaat tcatcaaaat aaaaataaga aaggagagct ccattagtag ccagaataag 481 tgggttttgc tttcaatttt cacagatcac agaagtttaa agagcagatc agtcatgcta 541 cttgggtgat cagacagact taaacaatta tgaagtgagt taaggtcctg aaggtgtctg 601 gaggtgctgg gtaaacacat cacaggtaag gaatgggaaa cctacctcag catttctgaa 661 aggcacaatc tatggaaggg agacctagtt aagccctttc tgatgtgtag aaaggagtat 721 gctgagctgt cttcttttaa aggatgagac cttcatagat tg //