LOCUS BG075143 757 bp mRNA linear EST 12-MAY-2010 DEFINITION H3143G07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3143G07 3', mRNA sequence. ACCESSION BG075143 VERSION BG075143.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 757) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075143.1. Other_ESTs: H3143G07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3143 row: G column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..757 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3143G07-3" /db_xref="taxon:10090" /clone="H3143G07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 235 a 160 c 154 g 208 t ORIGIN 1 aagaatcagc tgttttctca gctgatgtat tggcaatgtt caagtgggga taagttgccc 61 ttggtccact ttctaacatt ttctaacaag tatgtctctt accctctgaa tttcaaataa 121 gttggctttc agaatttgtg ttttttctac attttacatt catgccttcc tataaagtca 181 gagttgaaaa gtaggctgag atagccccta acaagagatg aaacctggtg agcagcactg 241 catcaaaccc tgcaggggag tgtaaacaaa ccaccctcca aaccagtaat gcacctttag 301 ctgagactca agctgtaagt gtctcagcga ccagcagatg gcagaagaaa ggactcatac 361 atttatcact ttaaattagg ctcaatggcc aagcaacagg gaggaaactt ggtcctctgt 421 atccgtaaga atttctaaca gatgtcagca tttcagttaa attagaaaca ccaaagccat 481 cccctcctac tgagtcctgt gaacgtgtaa gaaatgtaaa agagcttatg gcttgatttc 541 aagggcactg ttactttaaa cactcctcgg tcggcgttac agtcacatcc acagagttat 601 ccaggaaact cattacaaag ctcatcttgg gatgacagca agggtgtgga agaattggta 661 ctaaagtaac ttcaaagaaa ggtgaatgga catctgtctt taacaagctg gtacactttg 721 caattggatg caacaatacc caggattttg ctctaaa //