LOCUS BG074628 472 bp mRNA linear EST 26-JAN-2001 DEFINITION H3137D05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3137D05 3', mRNA sequence. ACCESSION BG074628 VERSION BG074628.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 472) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3137 row: D column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..472 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3137D05-3" /db_xref="taxon:10090" /clone="H3137D05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 112 a 120 c 93 g 147 t ORIGIN 1 ctgctttcag ggttttgtct atttacactt aatgcgtatt tgcatataca tttgctggac 61 acaccatggc attaatctga aggaacggac aacgttccag agtcgagagt tgtctctcct 121 tccctgtgcg gcttctggga tcaaactcag gttgtcacac ttggcagcac acaccaaaac 181 ccactaagct acctcatcag ccatttcagt ttcttgtcag tctgttcgag acagggtctt 241 gctgcgtgac tctacttgac ctggtgatca ctatttagtc caggttggct tccaactcat 301 gctttactta taccttttaa aggtaaggtc tcatgtggcc cagtcttcct tgaatttact 361 atgtaatcaa aggcaatctc gaacatctca ttttcctgcc tctgcctact gagtgctagg 421 atactaggta tgcaccagta tcaccagctt agccagtatg ggaattaaac cc //