LOCUS BG073326 692 bp mRNA linear EST 12-MAY-2010 DEFINITION H3121C12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3121C12 3', mRNA sequence. ACCESSION BG073326 VERSION BG073326.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 692) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073326.1. Other_ESTs: H3121C12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3121 row: C column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..692 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3121C12-3" /db_xref="taxon:10090" /clone="H3121C12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 241 a 142 c 139 g 170 t ORIGIN 1 agcagtgcat tttctttatt caatttgtaa agaacagctt gaaaacaaaa tgctagtaca 61 ctcttaaaac attggctttg tcacctcaca gttcacttgc actgatagtt attacaaaaa 121 tcagaagtca ttgggtattt gctgtatagc cactagttgc ctaaacaaaa gctaatttct 181 ataaaatcac gaatttaatg cagctttaat aagagaaacc caaaattctc tcagttaact 241 ggatatatag tggtatatat ctttaagcag aaaacttcaa aaaacagtaa caaaaaaatg 301 ggtcaccata gtaaaatatt ctgacccgac agttcctaca aacagcaaca tccactgtat 361 ataaaggaaa ccattgtttg tggtaaaaaa gtctagagat caagtataaa tgtggagtaa 421 aaacaacaac ctaatccatc ctgggcagag ctgtttctaa ggagacacag gcagcagtct 481 acacagggag ggaaggggct agcacatccg accactgagc gcacctgcag cagtcagccc 541 ccttcccggg gttgctgcac actgtaaagg tccttgcaca ggggaaagct gtgtcatcag 601 gagtgctaca gcaaacagta aaggtgagcg atgcccaact gtcctgatca aatacaattc 661 acaaaaaggt ggcaatgtct cgtgatgtgg gg //