LOCUS BG072841 665 bp mRNA linear EST 12-MAY-2010 DEFINITION H3115E11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3115E11 3', mRNA sequence. ACCESSION BG072841 VERSION BG072841.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 665) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072841.1. Other_ESTs: H3115E11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3115 row: E column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..665 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3115E11-3" /db_xref="taxon:10090" /clone="H3115E11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 264 a 117 c 105 g 179 t ORIGIN 1 aggtattaaa cattttattt aaagatttta atgtaaaaaa aattatacaa atacagatta 61 cattatagtg aacaaggcag tgttctacat gataaaaatt aaaacaattt tctaaataag 121 tactggcaac agggacacag ataactagac acccatccag ctgcatgtga taaaccgatc 181 tgatcacaag cttatgcaac ataagtggtg tctaagacac caagcgccca tccctctgcc 241 tgtctccccg gagactctga gagaaggagg cttccaccac atacagagag tttgcatggc 301 acttaaggac tgaaaactag aactgaatta aaatcatctg taataattct gtataaaaca 361 cacatagtaa gtcttattag ttaacaacaa taagaaaaaa aaaagattta aaaacaaaga 421 ccaccattaa ttatggttaa aaccttatca cagaaaactg ttcatcattt aaatgttatt 481 ggcagaaaat gtacaggttt tgttgtgggt gagggtaggg aagacataca acttgaattt 541 actcatctaa gtttgttgac aaatgcatga taattcactg gttatccttt cttaaaatgt 601 ttttcacaaa aaaacacaga ctcacactcc aataagaaat atggccacaa gaaaaagaat 661 aacct //