LOCUS BG072655 565 bp mRNA linear EST 12-MAY-2010 DEFINITION H3113D07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3113D07 3', mRNA sequence. ACCESSION BG072655 VERSION BG072655.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 565) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072655.1. Other_ESTs: H3113D07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3113 row: D column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..565 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3113D07-3" /db_xref="taxon:10090" /clone="H3113D07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 159 a 130 c 104 g 172 t ORIGIN 1 ataagacaaa atttaatgaa aatcggtcag tgggtatata tagtccatgg tgctagccat 61 atgcaactgt tacagaaatg taaaccagcg gatggggaag aaaatattac atattgtcat 121 catctgattc atcttcttcc ttcaaagatt ccttggcata tttctctgct tcctctctta 181 tgtctttggg aacaatttca tgtcttcctt tagttaattc accaacccag ctgagctcca 241 gttcaaaagc tttatcctta acttcatcgt gtactatgta aattattttt gcaacttctt 301 taactacatc acggcaagtc atttccttca tctgaagctt ttctatctct gtctttgcag 361 cctgcctggc tttgccaatc gcacagcccc agtaaccata tgaaacacct gatgggtcga 421 tcatatagag ctgtgcacca tcattcgcac tgtaagaccc caacatgaaa ctgcagccaa 481 aaggtctaac agcgctgtag agtgtatagg cgtgtacata catggccact ctgtctgcaa 541 gatgctggga ggaagagaag agact //