LOCUS BG072020 735 bp mRNA linear EST 12-MAY-2010 DEFINITION H3105G09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3105G09 3', mRNA sequence. ACCESSION BG072020 VERSION BG072020.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 735) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072020.1. Other_ESTs: H3105G09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3105 row: G column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..735 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3105G09-3" /db_xref="taxon:10090" /clone="H3105G09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 240 a 154 c 137 g 204 t ORIGIN 1 atagaacaag ggaaacattt attaaaaata tttaactgtc taatacatta tactttaacc 61 catatttata gtaaaggatt cttacaagga agaataaaca gctttatgat acaattagta 121 taagaaatat ccacatgggg gacttctttg tagtgtaaaa acaccataca tctgaaatga 181 ccattttgca tataaaagct accaatgatg cttctgtgca caatgattaa aaaattcaac 241 acaaacaaaa tccaaaatat acaattaatg caagctatcc acagctagcc caaactcaat 301 gatgaggaaa cactggagca ggtttagttc cactttgtct gaagttacac atggtagatt 361 gacttgtatc aatggctctg aggtggcttt tatggagtca gtacataaaa gctgttctct 421 ctctatccag taagcttcac agactgtaaa acttcaccat taatgcactt tgatactgca 481 gctgttgcca aagcaaatgt agtgtctaca gcggccatgg caagtcacta aagtcaacgg 541 ggccaccagc cccgcatctg cttccaagag gctcatgatg acagccattg ctgcctcatc 601 gttactggga ctacttgatc cttggtcgtt atctatcata tcgatgccta tgtgggggtt 661 ctcaccaaga atagaagaac tatcagaata gggataccct ggggtctcct gagcctgccc 721 tggtaatagt ccagt //