LOCUS BG071933 799 bp mRNA linear EST 12-MAY-2010 DEFINITION H3104G12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3104G12 3', mRNA sequence. ACCESSION BG071933 VERSION BG071933.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 799) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071933.1. Other_ESTs: H3104G12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3104 row: G column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..799 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3104G12-3" /db_xref="taxon:10090" /clone="H3104G12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 234 a 167 c 174 g 224 t ORIGIN 1 aacggtatcc atggagattt tatttagcag tcagagagcc ctttacatcc actctgttgg 61 gcaggatcca gtcaacctgc tcagcctgct taggctcagc agttggattt aggcacaaag 121 ggtttagttt tgtctcgaca ccaagtttta attgcttgag gttactgcta cagcaagagg 181 atcttgttga aaaacatgtt gaacagtttt catcttctgt cagtagaaat taatgtcctt 241 tccttaagta aagttaggca tttttggttt tagaattggt tcccaacata aagcaacagt 301 aagacagttt gacctctgga gtcagcatta ggatgcccag tgtcatcagc ccctgcatgg 361 gcgccgccag cacaggctct gcccgggtgg cttcggagag agtgcttctg agctctttgg 421 tatgctgctc acagccacgc ttacctcttc tgtcaccgca ggtcactttt gtttgcagag 481 gtgccaggca gctgtcccat aggccacact aggactctgg agctgcttca catagtaagc 541 tgttgtacaa taatcgtgat gtaacaacca cccagttaaa atagaagaac atttacaatt 601 gattaccata caaaaatatg caatttccat cataaagtag tgtttgttaa tagtacctga 661 ccttcttgta agttggcaaa aaagttctga aaggagctga agtaaatgtg agggatgaaa 721 attacaaaga aacgaattct caaccgcaaa ataaatctag aacaacttat agaagtagca 781 aagcagcttc atgaaaatg //