LOCUS BG070991 582 bp mRNA linear EST 12-MAY-2010 DEFINITION H3093E04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3093E04 3', mRNA sequence. ACCESSION BG070991 VERSION BG070991.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 582) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070991.1. Other_ESTs: H3093E04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3093 row: E column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..582 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3093E04-3" /db_xref="taxon:10090" /clone="H3093E04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 123 a 119 c 130 g 210 t ORIGIN 1 attttaaaaa ttattttata aagatttatt gtttgtaatt acatgcaaag acaaaaaaga 61 tgtaagcctt cccatcaata cgtgcacctg catgtaggag agcccttgaa gggcagaggc 121 atcagatacc ctggagctgg agttacggac tatgaccact tggtgtgggt gctggaagct 181 ggacttgggt cctcggggac tgaacttgga tgctcttgaa tgttgagtca ttctgaaagc 241 cccattttta aatgtttgtt gttttttgtt tttttgtttt tttgtttttg gctgggtggg 301 tacccgtctt tctgtttctg taggcttgtt gggaagttaa taatcctata gatctaagcc 361 tcttttcctg ggtgaagttg ggaacggtct ctgacagtgc agacaatgca gatctcagta 421 tgtcagtctc aaagaagtca gtacactttg ttttcctttc ttctcttctc ccttctatct 481 gttagtacct cttttctggg tgcattttcc tcaacacatt gggttgcact ctttctttaa 541 agctctcctc ccctccgtat gtcggcttgt ccaccacgtg gc //