LOCUS BG069970 722 bp mRNA linear EST 12-MAY-2010 DEFINITION H3083B09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3083B09 3', mRNA sequence. ACCESSION BG069970 VERSION BG069970.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 722) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069970.1. Other_ESTs: H3083B09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3083 row: B column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..722 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3083B09-3" /db_xref="taxon:10090" /clone="H3083B09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 222 a 154 c 155 g 191 t ORIGIN 1 ccttttgtat aaatccattt attgaacaaa ctcacagaaa tggaattgct ggtacacttg 61 aaggcttttt ggagatattg tccaaaatta accatttaaa aatattgttc tgtgaagtac 121 cccagaaggc ttgtggagta caagggagtt ggagcagagt caggctgact ccagcaccag 181 ctgttgctga catcttctac tccttacctg ttcagtccca cctgagtgtg cactccgtgt 241 ctaccctgtc tcctcaaccc agacctgctc cagcaaggat tctctatgtg ttgtctctgg 301 aacatctttg tccctaaatt caatgggacc tctgggtttt cattggattg gcagagtact 361 tcctctgcac cagagaacac ctagtcctat atacacagca tatatcagaa taataataga 421 tttcctataa gacttcacaa acggttccca tgggtacaaa ggaggaaacc atctcatcag 481 gatgaagatt agggggaaaa aaaacccaaa aaacaatatc cttctgagaa gatggcagga 541 ggttcagcct gaagaaaggt agatggagag acgacctaag caggaaaagt aggaacagag 601 acagtggcct ctgtgccctg gatgccttgg ctagaacaag atgactcact tcatagagtt 661 tctgaggaac aaataaattt ttacaaaaat attcattttc atggagctga ggatgtagct 721 ca //