LOCUS BG069776 739 bp mRNA linear EST 12-MAY-2010 DEFINITION H3080A04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080A04 3', mRNA sequence. ACCESSION BG069776 VERSION BG069776.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 739) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069776.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: A column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..739 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080A04-3" /db_xref="taxon:10090" /clone="H3080A04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 168 a 200 c 142 g 229 t ORIGIN 1 accaggaaga tctactttta ttattctaac tgcagtgcac agatagccat caaaggccac 61 ttgggaaaat ggtttacctc tttttgtatt ctaacagagg taggaagcca tctactgtat 121 agcatcaatc cttgaggtac attgggaagg aaatggccca atctttccac caaataatac 181 acaccctagt acatcttata aaataaaaag aacacatgat atataacata tcccttgaaa 241 cagggaagaa aaaaatcatt cggtgggaat atctttggcc tctgcaccag tttgttccag 301 ctcatcttcc atgattcccg ggattgctat gacaggtaac gtgcttcctg cgtctgctgt 361 tggcatagct gcttcgtttc tggcctcagc agcctcacct ctggtcttgt cttcgatgct 421 cctggtttca gatgctgctt cacaggtctg ctcttctagt agcttttcag tgtgggggtc 481 actgctggcc tctgctgtgt ccacaggccc ttccacttca gttaggacgt cactatgcgc 541 tgcagcaggt tctccttccc cctctacagc cttcactgct gctgtgatca cctctgctaa 601 gacttcggca gctacctcct ctggtgtctc ctccttctcc tctcctacat tttcatctcc 661 ttctgtctca aggtcagcag tttcattgac aaaaggatcc tcacccttga ggtatttttc 721 cagcatcttc actatatgt //