LOCUS BG068080 729 bp mRNA linear EST 12-MAY-2010 DEFINITION H3061E07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3061E07 3', mRNA sequence. ACCESSION BG068080 VERSION BG068080.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 729) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068080.1. Other_ESTs: H3061E07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3061 row: E column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..729 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3061E07-3" /db_xref="taxon:10090" /clone="H3061E07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 196 a 166 c 179 g 188 t ORIGIN 1 aaaggaagga ttatatcata gattgtcagg tgtacttagc tgacctctgt gacaaaatga 61 aagatgctct gattaatgac tcctggtgca ggatacaagt cagtcctgcc tttctttgct 121 cctgttaact agatgagggt cctaaaactg actgcaggaa ctgacaaact aaagagggat 181 aagtcacaga taactcaagt gaccccaccc caggggccaa gcaggccttc tgtgttccca 241 gtctaaaagg ttcttctaaa ccccgaataa ggctatatgc ttcctgactg ggactggcct 301 ggtatgctga acagcctgga tcttgttcct gagcagtggg acttaagaga tctgatgaac 361 gttttgatat tctggttctt aaagatcgtt gtgggctggg gtgatacctc agtcaatcaa 421 gtgcagatat aagaacctgg gtccaagtcc cccagaaact atattaagag ctgagtgcaa 481 cagtatgtgc taggcaggaa gcagaggatc agcaagctcc aggtacagac agacagacat 541 acatacacag ggagagaggc agctagtgtg cctgcagtgg gtacaccagc aatggtccat 601 tcctgttggc tttgtcttcc agggctcatc agtgtgtcag gtaactgcca ttggtgtcac 661 cgtcatcttg ctctacacct ctcgggcctg ctacaacctg ttcatcttgt cattttctca 721 gatcaagaa //