LOCUS BG067972 668 bp mRNA linear EST 12-MAY-2010 DEFINITION H3060C10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3060C10 3', mRNA sequence. ACCESSION BG067972 VERSION BG067972.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 668) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067972.1. Other_ESTs: H3060C10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3060 row: C column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..668 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3060C10-3" /db_xref="taxon:10090" /clone="H3060C10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 137 a 181 c 200 g 150 t ORIGIN 1 gagagaataa aagctattta ttgactaata gttcaaagtt ttcatccaat tttggacagt 61 gttgggaaaa tcaatctttg accatagcgg ccctggccct cctagaatac atgctggaat 121 gaacctctcc cctgtggtcc tgaatggtcc cacacctcaa agttgtgctt ccagcttgta 181 gggctcagta taaagatggg agtcaaaagc tggactgcag cagagtgact ctgaagggcc 241 atgccccctc ttcctgggtc agagctggag gggccttccc agggtcccac ctggcctccc 301 atggggccag gcctctccgg ctgccttggc atgagaaccc tgtggtagca gaagtagcct 361 tgtgaggagc tggggacgag gtgacctggg gcagttcttc actgggaggc tgtgggcttg 421 gctggagaca gtctcccctg gtatccaaat ttctgcctgg agaggctact ccaggaccca 481 gaactcctga gccatttcgc agctccaaca ataggcctct gttccatgtc aggctggcgt 541 ggagctgggg acagtgtcct ccccagggtc aggagcctcg gggaggtagg gcgaggaaga 601 gggagcccgc atgcttggtt tctacgcatg cgctccagct gctcctgcgc gctcatacga 661 ggccgcgc //