LOCUS BG066690 550 bp mRNA linear EST 12-MAY-2010 DEFINITION H3045H03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3045H03 3', mRNA sequence. ACCESSION BG066690 VERSION BG066690.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 550) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066690.1. Other_ESTs: H3045H03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3045 row: H column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..550 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3045H03-3" /db_xref="taxon:10090" /clone="H3045H03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 109 a 150 c 150 g 141 t ORIGIN 1 tgggtcagaa gcagcaagag agccagaggg acaggaaccc agattatttg ttcttcaggt 61 agatcttcgg ggtctgccag ttctcagggg cttccttcag gcctgcctta agccagatgc 121 gcttcaagtc tttctcaaat ttgatctgct tcttcttcaa acgtccttcc cggaccttgc 181 gacgtagaaa ccgggtcctt ttgaccagtt tacggtactt gtggtggttc atctttcgcc 241 ttcggatctt cagcacgttt ttgcactgca ctggagtggc atcccaggct tccctgactc 301 cctgctgggc ttcctcctcc ccctgcctag gtggacattc gtagaactgg gagggagcca 361 gagtcactgg gacctcgaca ttccgtctgg gcaataagta ttgagcagtc agccagctct 421 ctagaggact gatggccatc ttcctgggga ccggaactcc tcaagctctg actgggtcct 481 cttaccaggg agggaggcag cccgacttgg gcttgcaggc tgcaaactgt aaaggggtcg 541 aaaagcatag //