LOCUS BG066646 743 bp mRNA linear EST 12-MAY-2010 DEFINITION H3044E02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3044E02 3', mRNA sequence. ACCESSION BG066646 VERSION BG066646.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 743) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066646.1. Other_ESTs: H3044E02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3044 row: E column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..743 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3044E02-3" /db_xref="taxon:10090" /clone="H3044E02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 180 a 177 c 180 g 206 t ORIGIN 1 ggttttggtt ttgagacagg gtctctctgt gtagccctgg ctgtcctgga actcactctg 61 tagaccaggc tggcctcaaa ctcagaaatc tgcctgcctc tgcctcccaa gtgctggggt 121 taaaggtgtg cgccaccacc gcccggcttt aaacttaact tttaatgtat gttttgcctt 181 aacgtgtcag acaccttatg tgtgatgccc atggaggcca gaagagggca ccacttccct 241 gtgactggac ttacagcctt gtgaggtgtc ccgtgggagc taagaactaa aactggtaag 301 cagtaaacca tactttgcag gagccacagt gccttctaaa cctcagtggt catctctcca 361 gcccctgggg ttggttttgt ttttgacaca gtatgcagtc tgactagcct ttgacttctt 421 gacaatgctg ctgcactgat ctctgggagc tggaaataga cacaagctac cacacacaaa 481 agctggaggc agtcttgact aagggtcata gaaacatcta ctgacagtcc gcttgtcatt 541 ctgctcattt cccctttatg agcaaaaata ctggaaataa agcagtgagt gagtcccagg 601 caccttggca gagtgtgtgg atactcacct ttccttggga tctttaatgt aagtgtcaat 661 aaggagactg tacatttcag agtgtatgtt ttccatggca atttgggaag catagaaaca 721 gcgggcctct gtaacttgaa ctt //