LOCUS BG065273 669 bp mRNA linear EST 12-MAY-2010 DEFINITION H3029B12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3029B12 3', mRNA sequence. ACCESSION BG065273 VERSION BG065273.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 669) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG065273.1. Other_ESTs: H3029B12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3029 row: B column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..669 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3029B12-3" /db_xref="taxon:10090" /clone="H3029B12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 214 a 174 c 146 g 135 t ORIGIN 1 ctttctcatg tgtgtttatt gagcgccgac agagcccgtg gtactgtgct caggattcag 61 agccacagtc tagtcagaac gagaccagag ctagtccaca gaatgtttca tagctgtgta 121 acatctgtta cgggatcagg atggggaaaa ctaatcacga aacaaattcc tattcaaaag 181 caacagaacc tcctctgaga gtaatataga ttctaggcac acatactcac cacacacaca 241 cacacacaca cacacacaca cacacaccct cagaatgaac acccaactat gcccacttag 301 ttgtatatgc atgcatatac agatgttggt gggcaagtaa attaatatat atgctgtaca 361 cacacacact ggcacacgca cacacataca ctctcacaca aaccaccaca cagacagaaa 421 atctggctta tgctatcaaa gacactatgt ctccaggttc tagcggaagt aacctgtcct 481 agatgtctgc agcatgcaaa acttgaaaga tccagagagt cagtttagga gaacaatggg 541 ggcacatggg tatgcttcca tcctcagagc cccagccata gcacggaagg caacaacaaa 601 gcctttgtga agggctccag gggcagagca gaggacctgg aggctccctg tgatggcggg 661 ggccaggag //