LOCUS BG064479 594 bp mRNA linear EST 26-JAN-2001 DEFINITION H3020C01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3020C01 3', mRNA sequence. ACCESSION BG064479 VERSION BG064479.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 594) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3020C01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3020 row: C column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..594 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3020C01-3" /db_xref="taxon:10090" /clone="H3020C01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 158 a 134 c 160 g 142 t ORIGIN 1 gggacacaaa ctacaatatc actctttatc ttaaaaagta aagggaatcc tggggttaag 61 tacacagagc acctaagccc ttcgggaagt ttagtgtcag ccctacaaag taagctttgg 121 cttcctggca ccatgaggct caatcttccg gaagtcttct caaagtcttc cagaaggtag 181 gggaggagga tgaagcagcc cttccccctc agtcacagtt acaggggggc ctcgggctgg 241 acaggagacg gcagatgaca gccagacaat attatccagg ggctatttac aaggggactt 301 tccttgggat catttcaaaa acgctacttc tggaatctct cccttggcct tgagaagagt 361 gaaggcctga gcagatctgg ggaagcccca gttattgcct tgaaggcact tctgagacca 421 ctcaaggttc atgccaaact gggtagaaaa tgcttgcaac atttcctgct gttctgggga 481 aagcgtgggt actggactgg aggaaggtgt gggtgcagac atggcgaagg ctctttggat 541 ttcttcaggg ctggcattcc gcacaaataa ttcatcattt acaaggatag tcga //