LOCUS BG064084 794 bp mRNA linear EST 12-MAY-2010 DEFINITION H3015C11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3015C11 3', mRNA sequence. ACCESSION BG064084 VERSION BG064084.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 794) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064084.1. Other_ESTs: H3015C11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3015 row: C column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..794 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3015C11-3" /db_xref="taxon:10090" /clone="H3015C11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 253 a 172 c 158 g 211 t ORIGIN 1 aggtacttct atgttcaaat gaacataatt ccatttgcaa aatgtaattg ctaatgtctt 61 ttccataaaa catggttggc aaaataaaaa aggcacagaa gggactaagt gggtaggttt 121 tcaactttca gagaagggta ccaaagcaca tgtcaaatat cgttcatgaa gaaaagctga 181 aaaataatat attcggtaat tcatgcacaa cttgagctac gcaaaacttt ttagaagtct 241 cctgaggctg gaggagaaaa tgagttttcc aatcacatgc gcctgtgaac agaataaagc 301 tacacataca ttcggtttta acagtggacc catgtttttc agaacaaaat gtgaggcaat 361 taagcaaagg aaaacaatac caaaatacct tcataaacaa acttgacctg tagcctctgt 421 cttgtgcgga gaatgtccaa taagatgtaa aatgcagcat acatagtcat gtaatctaga 481 aactttccat gataatttat tgcaaattgc acttgacagt tcaccacaac aatggaaagc 541 tggccccctg ttggtttgca cagtccttga gccccaaact gaagttgaag tcaccagtaa 601 aatgatctgg ataaaaagtt tgctgctgtg ctcaaccagc tggctccacc ttcagggtgc 661 gatccaaccc gggacactgc cttgtcctgc tcctttgtgg gactctcatc ctcaggcagg 721 tagtcaggta gctctgtgtt ctcttccact tccacagggg catcctgaaa agggacagca 781 tctcttctcc actc //