LOCUS BG063610 553 bp mRNA linear EST 12-MAY-2010 DEFINITION H3009D02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3009D02 3', mRNA sequence. ACCESSION BG063610 VERSION BG063610.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 553) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063610.1. Other_ESTs: H3009D02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3009 row: D column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..553 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3009D02-3" /db_xref="taxon:10090" /clone="H3009D02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 106 a 164 c 160 g 123 t ORIGIN 1 ggttcctggt gtttaatgga gacaggctgg gtaagttgac gacggttcag gtggctttga 61 ggggcaatca aggccatctc tccagaggca tcgtggggat gccagattgg ggaatcctcc 121 atgacctggc agacaggcac caggaagctt taagcccagc aactggagca ctgctgaccc 181 ctggtggcca cttcagccca ctgggaactt ctcatcggcc tggacctggc tcagtttccc 241 cgtgggtgtc agacagtagg taccacctac tccagggcct tcactagggc ttcattggcc 301 tcaatacgga tctggatctc agcccgtgct gcctcgtccg ccgcacctga cagttctgac 361 tgcgccttct ccaggttggc ccgggctgcc cccaggtcca gcatgtccag tgtcacagct 421 tcttcagcta gtaactgcac agaggagtcg gcattcacag tgacggagcc gctgctcaca 481 aagtacttag tcgtggtgcc gtcttctgtg tgaaccacta ccagcccagg ccgtagacct 541 gtagtgtggg gac //