LOCUS BG063276 543 bp mRNA linear EST 12-MAY-2010 DEFINITION H3005B11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3005B11 3', mRNA sequence. ACCESSION BG063276 VERSION BG063276.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 543) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063276.1. Other_ESTs: H3005B11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3005 row: B column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..543 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3005B11-3" /db_xref="taxon:10090" /clone="H3005B11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 188 a 120 c 83 g 152 t ORIGIN 1 atattaaaat gtattttatt aatgagacta aaaattttag gaggaaatcc caatttcccc 61 cggatcaata tttctcaaac atgataatca aatgaggtga gtagacaaat aagattttca 121 tatataaaca acacttaaga aactatagac aaaacttgtc tttggagtaa taaaaaagaa 181 accaagggta ttggtattga ttcaaataag gtacgtatca gcagtctttt attttaaaat 241 gtaattaaag taacataacc cctctctttc ctgctgcgat tgcaaaggcc cacaccatgc 301 ccagctggct ctctttgcct catagttctg gatcagattg caagcaagca ttcagctacc 361 accccaggac catgcctgct tgcctctgcc acgctcccca acataacagt catagactca 421 ccctctgaaa cagtaagtac caatgaactc ttctataaca caccttggcc agggattgtc 481 acagcaatag aaaatatata cacatatgca tgtatataac ctgtcaagtc catttagtat 541 tgc //