LOCUS BC143728 6235 bp mRNA linear HUM 08-JAN-2009
DEFINITION Homo sapiens zinc finger protein 638, mRNA (cDNA clone MGC:177259
IMAGE:9052242), complete cds.
ACCESSION BC143728
VERSION BC143728.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6235)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 6235)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 16 Row: A Column: 20.
FEATURES Location/Qualifiers
source 1..6235
/db_xref="H-InvDB:HIT000502171"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177259 IMAGE:9052242"
/tissue_type="Cerebellum, Lung, PCR rescued clones"
/clone_lib="NIH_MGC_348"
/lab_host="DH10B"
/note="Vector: pCR-XL-TOPO with reversed insert; Clone
identification sequence tag: AGGAGGTG"
gene 1..6235
/gene="ZNF638"
/gene_synonym="NP220"
/gene_synonym="Zfp638"
/db_xref="GeneID:27332"
/db_xref="HGNC:HGNC:17894"
CDS 277..6213
/gene="ZNF638"
/gene_synonym="NP220"
/gene_synonym="Zfp638"
/codon_start=1
/product="zinc finger protein 638"
/protein_id="AAI43729.1"
/db_xref="GeneID:27332"
/db_xref="HGNC:HGNC:17894"
/translation="MSRPRFNPRGDFPLQRPRAPNPSGMRPPGPFMRPGSMGLPRFYP
AGRARGIPHRFAGHESYQNMGPQRMNVQVTQHRTDPRLTKEKLDFHEAQQKKGKPHGS
RWDDEPHISASVAVKQSSVTQVTEQSPKVQSRYTKESASSILASFGLSNEDLEELSRY
PDEQLTPENMPLILRDIRMRKMGRRLPNLPSQSRNKETLGSEAVSSNVIDYGHASKYG
YTEDPLEVRIYDPEIPTDEVENEFQSQQNISASVPNPNVICNSMFPVEDVFRQMDFPG
ESSNNRSFFSVESGTKMSGLHISGGQSVLEPIKSVNQSINQTVSQTMSQSLIPPSMNQ
QPFSSELISSVSQQERIPHEPVINSSNVHVGSRGSKKNYQSQADIPIRSPFGIVKASW
LPKFSHADAQKMKRLPTPSMMNDYYAASPRIFPHLCSLCNVECSHLKDWIQHQNTSTH
IESCRQLRQQYPDWNPEILPSRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRS
RSPMHYMYRPRSRSPRICHRFISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPERMSR
RSVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTS
ATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSDKAVSLQRKLRKEQSLHYGSVLLITE
LPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEMEFKEAITAIMKYIETTPLTIK
GKSVKICVPGKKKAQNKEVKKKTLESKKVSASTLKRDADASKAVEIVTSTSAAKTGQA
KASVAKVNKSTGKSASSVKSVVTVAVKGNKASIKTAKSGGKKSLEAKKTGNVKNKDSN
KPVTIPENSEIKTSIEVKATENCAKEAISDAALEATENEPLNKETEEMCVMLVSNLPN
KGYSVEEVYDLAKPFGGLKDILILSSHKKAYIEINRKAAESMVKFYTCFPVLMDGNQL
SISMAPENMNIKDEEAIFITLVKENDPEANIDTIYDRFVHLDNLPEDGLQCVLCVGLQ
FGKVDHHVFISNRNKAILQLDSPESAQSMYSFLKQNPQNIGDHMLTCSLSPKIDLPEV
QIEHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETLVQQEEP
CEEEAEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQM
FNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVEAV
AEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKET
RMDLQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSK
TSILAVSDVSSSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKE
FGLLKPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETE
ARPSIMKRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVN
PSQAKQNPLKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEGELSFVTLDEIGEEEDA
AAHLAQALVTVDEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCISHSEPKDVTVLSV
AEEQDLLKQERLVTVDEIGEVEELPLNESADITFATLNTKGNEGDTVRDSIGFISSQV
PEDPSTLVTVDEIQDDSSDLHLVTLDEVTEEDEDSLADFNNLKEELNFVTVDEVGEEE
DGDNDLKVELAQSKNDHPTDKKGNRKKRAVDTKKTKLESLSQVGPVNENVMEEDLKTM
IERHLTAKTPTKRVRIGKTLPSEKAVVTEPAKGEEAFQMSEVDEESGLKDSEPERKRK
KTEDSSSGKSVASDVPEELDFLVPKAGFFCPICSLFYSGEKAMTNHCKSTRHKQNTEK
FMAKQRKEKEQNEAEERSSR"
BASE COUNT 2190 a 1136 c 1353 g 1556 t
ORIGIN
1 gctttttcgg cgtcgagact ggaggctgag tgctaaactg tgtggggcgc ggatgggatc
61 cagctgttag tcggctttgt gttattcttg gaaaatttcg caccacttgt gaattccttg
121 aacctgggca ttgcaaaccc acttctgttg ggcccatctc ctttgcactt tgctcagatt
181 aagactcagt tggcgcttca gcagctgaat gccgttgcct cacatggttc aacaccacct
241 tatactttat taaatcaggc tttcttgaaa atagccatgt cgagacccag gtttaatcct
301 cgaggagact ttccacttca aaggccacga gcacctaacc cttctgggat gaggcctcca
361 ggaccattta tgaggcctgg atctatgggt ctcccaagat tttacccagc agggagagca
421 cgtggaattc cacacagatt tgctggccat gaatcttatc agaacatggg gccacagaga
481 atgaatgttc aggtaactca acacagaact gatccaagat tgaccaaaga aaaactggat
541 tttcatgaag cacaacagaa gaaggggaag cctcatggta gccggtggga tgatgagcct
601 catatatctg catcagtggc agtgaaacag agttctgtaa cacaggttac agagcagagt
661 cccaaagtac agagccgcta tacaaaagag agtgcctcaa gtatcttagc aagttttgga
721 ttatctaatg aagacctaga agaacttagt cgctatcctg atgaacaact aactcctgaa
781 aatatgccat taattttgag ggatataaga atgcgaaaaa tggggcgccg attacctaat
841 ttaccttctc agagcagaaa taaagaaaca cttggtagtg aagcagtttc aagtaatgtg
901 atcgattatg ggcatgcaag caaatatggc tacacagaag atccacttga agtacgtatt
961 tatgatcctg aaattccaac tgatgaggtc gagaatgaat ttcagtcaca gcagaacatt
1021 tctgcatctg ttcccaatcc aaatgtgata tgtaattcta tgtttcctgt tgaagacgta
1081 tttcgccaaa tggacttccc cggtgagtcc tccaataatc ggtccttttt ctcagttgag
1141 agtggaacca agatgtcagg cttacacatt tcaggaggac agtcagtcct tgaacccata
1201 aaatccgtca accaatccat taaccaaaca gttagccaga caatgagtca atctctgatt
1261 cctccatcta tgaaccagca acctttttcg tcggaattaa tttcatctgt aagccagcaa
1321 gagcggatcc cacatgaacc tgtgattaat tcatctaacg tacatgttgg atcaagagga
1381 agtaaaaaga attaccagtc acaggctgac attcccattc ggtctccctt tggtattgtg
1441 aaagcatcct ggctaccaaa gttttcacat gctgatgccc agaagatgaa gagacttcca
1501 actccttcta tgatgaatga ttattatgca gcatctccaa gaatatttcc acatttgtgt
1561 tctctgtgta acgtagaatg tagtcatttg aaggattgga ttcagcatca aaatacatct
1621 actcatattg agagctgtcg acagttacgt caacagtatc ctgattggaa tcctgagatc
1681 ctcccatcga gaagaaatga gggcaataga aaagaaaatg aaactccacg aagacgttct
1741 cattccccca gtcctaggcg ttctagaaga tcaagctcaa gtcacagatt ccgtcggtct
1801 cgaagcccaa tgcattacat gtataggccg agaagtcgaa gtccaagaat ttgccatcgt
1861 ttcatttcta gatacagatc cagatccaga tcccgttcac catatcgaat tagaaatcca
1921 tttagaggta gtccaaaatg ctttcgatca gttagccctg agaggatgtc aaggagatca
1981 gtgagatcat cagatagaaa aaaagcatta gaagatgtag tacaacgatc tgggcatggg
2041 acagaattta ataaacagaa gcatcttgaa gctgctgata agggacattc accagcacaa
2101 aagcctaaaa ctagcagtgg aacaaaacca tcagttaaac ctacaagcgc tacaaagagt
2161 gattcaaatc taggaggaca ttctattcgt tgtaaatcaa agaatcttga agatgacact
2221 ttgtcagaat gtaaacaggt gtctgataaa gctgtttctc tccagcgaaa gcttcggaaa
2281 gaacagtcat tgcattatgg ttcggttctt cttataactg aattaccaga ggatggttgt
2341 actgaagaag atgtgagaaa attatttcaa ccatttggga aagtgaatga tgtcctaatt
2401 gttccatata gaaaagaggc ttacctagaa atggaattta aagaggcaat tactgcaatt
2461 atgaagtaca ttgaaacaac acctcttacg ataaaaggaa aaagtgtgaa aatatgtgtt
2521 ccaggaaaga aaaaagcaca gaacaaagag gtgaagaaaa agactttaga gtcaaagaaa
2581 gtatctgcat ctaccttaaa aagagatgca gatgcttcaa aagctgttga aattgttact
2641 tcaacttctg ctgccaaaac tggacaagcc aaggcatctg tagccaaagt aaacaaatct
2701 acagggaaat cagcaagttc tgtaaaatct gtggtaacgg tagctgttaa aggtaataaa
2761 gcttcaatca aaacagcaaa atctggtgga aagaagtctc tagaagccaa aaagactggg
2821 aatgtcaaaa acaaagactc taacaaacct gtgactatac cagaaaactc tgaaataaag
2881 accagtattg aagtcaaagc cactgaaaac tgtgctaaag aagctatttc tgatgctgct
2941 ttggaggcca cagagaatga accacttaac aaggaaacag aagaaatgtg tgtgatgctt
3001 gtctctaatt tgcctaataa aggatattct gtagaagaag tttatgactt agcaaaacca
3061 tttggtggtt taaaggatat cttgatttta tcatctcata aaaaggcata tatagaaata
3121 aatagaaaag ctgctgagtc tatggtaaaa ttttatacct gcttcccagt attgatggat
3181 ggaaatcaac tctcaataag tatggctcct gaaaacatga atataaaaga tgaggaagct
3241 atatttataa ccttggtaaa agaaaatgac ccagaggcaa acatagatac aatctatgat
3301 cgatttgtac atcttgataa tttaccggaa gatggacttc agtgtgtact ttgtgttgga
3361 cttcagtttg gaaaagtgga tcaccatgta ttcataagta atagaaataa ggcaattctt
3421 cagttagata gtcctgaatc tgctcagtca atgtatagct ttctgaaaca aaatccacaa
3481 aatattggtg accatatgtt gacctgctca ttatctccaa agatagactt accagaggtg
3541 caaattgagc atgacccaga attagaaaaa gaaagccctg gcttgaaaaa cagtccaatt
3601 gatgaaagtg aggtgcaaac agcaactgat agtccctctg ttaaacctaa tgagcttgaa
3661 gaagaaagta ctcccagcat tcaaacagaa actttggtac agcaggaaga gccttgtgag
3721 gaagaagctg aaaaagcaac atgtgattct gactttgctg ttgaaacttt ggagcttgaa
3781 actcaaggag aggaggtcaa agaagaaatt cctcttgtag catccgcttc agtcagtatt
3841 gaacaattca ctgaaaatgc cgaggagtgt gctttaaatc agcagatgtt taacagtgac
3901 ttggagaaga aaggggcaga aattattaac cctaaaacag cattgttacc atctgacagt
3961 gtgtttgcag aagaaaggaa cctcaaagga attctagaag aatctccatc tgaagcagaa
4021 gatttcattt ctggaattac acagactatg gtagaagctg tagctgaagt agaaaaaaat
4081 gaaactgttt cggaaatatt gccatcaact tgtattgtga cgttagtacc aggaattccc
4141 actggggatg agaagacagt ggacaaaaag aatatttctg aaaaaaaagg taacatggat
4201 gaaaaggagg agaaggaatt taatactaag gaaaccagaa tggatcttca aataggaaca
4261 gagaaggctg aaaagaatga aggtaggatg gatgcagaaa aggtggaaaa gatggcagca
4321 atgaaagaaa agcctgcaga aaacacttta ttcaaggcat acccaaataa aggagtgggt
4381 caggctaata agcctgatga aactagtaaa actagtattc tggctgtatc agatgtatct
4441 agcagtaaac caagcatcaa ggctgttata gtctcttctc ctaaggcaaa agctacagtt
4501 tcaaaaactg aaaatcagaa aagttttcca aaatctgtgc ccagagatca aataaatgct
4561 gaaaagaaac tttcagccaa ggaatttggt ctgcttaaac ccacaagtgc caggtcaggc
4621 ttggcagaaa gcagcagtaa attcaaacct actcagagca gtcttaccag aggaggcagt
4681 ggaaggatct cagccctgca aggcaagctt tctaaactgg attacagaga tataacaaaa
4741 caatctcagg aaacagaggc tagaccttcc atcatgaaac gggatgacag caacaataag
4801 actttggctg agcaaaacac taagaatcct aaaagcacta ctggtagaag ttccaaatct
4861 aaagaggagc cattatttcc atttaatttg gatgaatttg ttactgtgga tgaggttata
4921 gaagaagtga atccttctca ggccaagcag aatccactaa agggaaaaag gaaagaaact
4981 ctcaaaaatg ttcctttctc tgaacttaac ttaaagaaga aaaaggggaa aacttccact
5041 cctcgtggtg ttgagggaga actatctttt gtgacattgg atgagattgg ggaagaggaa
5101 gatgcagctg cacatctagc acaagctcta gtcactgtgg atgaagtaat tgatgaagaa
5161 gaactaaata tggaagaaat ggtaaaaaat tcaaattcac tttttacatt agatgaatta
5221 attgaccaag atgattgcat ttcccacagt gaacctaaag atgttactgt tctgtcagtg
5281 gctgaagaac aagatctcct caaacaggaa cgcttggtaa ctgtggatga aattggagaa
5341 gtggaagagc tacctttgaa tgagtcagca gacataactt ttgccacttt aaatactaaa
5401 ggaaatgaag gagatactgt aagggattcc attggcttca tttcttctca ggtgcccgaa
5461 gacccttcta ctttagttac tgtagatgaa atacaagatg acagcagtga tttgcattta
5521 gtgactttgg atgaagtaac tgaagaggat gaagactctc tggcggattt taacaacctt
5581 aaagaagagc ttaattttgt tactgttgat gaagttggag aggaggaaga tggagataat
5641 gatttaaaag ttgagttagc acaaagcaaa aatgaccatc ccacagataa aaaagggaat
5701 agaaagaaga gagctgtgga cacaaaaaag acaaaacttg aatccttgtc ccaagtgggt
5761 ccagtaaatg agaatgttat ggaagaagat ctaaaaacca tgattgaaag acacttaaca
5821 gctaaaactc caaccaagag agttagaatt gggaaaactc tgccatcaga aaaagctgtt
5881 gtgacagaac cagcaaaagg tgaagaggcc ttccagatga gtgaagttga tgaggaatct
5941 ggattaaagg attcagaacc agagcgaaaa cgcaagaaga ctgaagactc ttcttcaggc
6001 aaatcagtgg cgtctgatgt ccctgaggaa ttagactttc ttgtacctaa ggctggattc
6061 ttctgtccaa tttgttccct cttctactca ggtgaaaaag caatgacaaa tcactgcaag
6121 agtacacgtc ataagcaaaa tactgagaaa ttcatggcca agcaaagaaa ggaaaaggag
6181 cagaatgagg ctgaagaaag aagctctagg tgattggggg aaaggaaaga attca
//