LOCUS BC130391 1512 bp mRNA linear HUM 04-JAN-2007
DEFINITION Homo sapiens mitochondrial transcription termination factor, mRNA
(cDNA clone MGC:163263 IMAGE:40146422), complete cds.
ACCESSION BC130391
VERSION BC130391.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1512)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1512)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 8 Row: E Column: 22.
FEATURES Location/Qualifiers
source 1..1512
/db_xref="H-InvDB:HIT000390181"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:163263 IMAGE:40146422"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TAGTTTAA"
gene 1..1512
/gene="MTERF"
/db_xref="GeneID:7978"
/db_xref="HGNC:HGNC:21463"
/db_xref="MIM:602318"
CDS 21..1220
/gene="MTERF"
/codon_start=1
/product="mitochondrial transcription termination factor"
/protein_id="AAI30392.1"
/db_xref="GeneID:7978"
/db_xref="HGNC:HGNC:21463"
/db_xref="MIM:602318"
/translation="MQSLSLGQTSISKGLNYLTIMAPGNLWHMRNNFLFGSRCWMTRF
SAENIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMIT
NEQDLKMFLLSKGASKEVIASIISRYPRAITRTPENLSKRWDLWRKIVTSDLEIVNIL
ERSPESFFRSNNNLNLENNIKFLYSVGLTRKCLCRLLTNAPRTFSNSLDLNKQMVEFL
QAAGLSLGHNDPADFVRKIIFKNPFILIQSTKRVKANIEFLRSTFNLNSEELLVLICG
PGAEILDLSNDYARRSYANIKEKLFSLGCTEEEVQKFVLSYPDVIFLAEKKFNDKIDC
LMEENISISQIIENPRVLDSSISTLKSRIKELVNAGCNLSTLNITLLSWSKKRYEAKL
KKLSRFA"
BASE COUNT 494 a 259 c 326 g 433 t
ORIGIN
1 tctccagcct ttctggaggg atgcagagcc tttccttagg acaaacaagc atttcaaaag
61 gtttgaacta cctaaccatt atggcaccag gaaacctctg gcatatgaga aataactttc
121 tctttggttc aagatgttgg atgactcgat tttcagcaga aaacatcttc aaatcagttt
181 catttaggct ttttggtgtg aagtgtcata atacagacag tgagcctttg aaaaatgagg
241 acctactgaa aaacttactt actatgggag tagatattga catggcaagg aaacgacagc
301 ctggagtttt tcataggatg attaccaatg agcaggacct gaagatgttc cttctttcca
361 aaggagctag caaagaagtg atcgctagca tcatatcaag atatccacga gcaataacac
421 gtactcccga gaatctttca aaacggtggg atctgtggag aaagattgtg acatcagacc
481 ttgaaattgt aaatattttg gaacgttctc ctgaatcctt ttttcggtcc aataacaacc
541 taaacttaga gaataatata aagttcctct actcagttgg attgacccgt aaatgccttt
601 gtcgattgtt gaccaatgcc cctcgtacct tctccaatag tcttgatctg aataaacaga
661 tggttgaatt tttgcaggca gccggtttgt cattgggtca caatgatccc gcagattttg
721 tcagaaagat aatttttaaa aaccctttta tcttaattca gagcaccaag cgggtgaaag
781 ctaacattga attcttacgg tcaactttca atttgaacag tgaggaactg ctggttctga
841 tatgtggtcc aggagctgaa atcctagacc tttccaatga ctatgccaga agaagctacg
901 caaacatcaa agagaagctg ttttctcttg gatgtactga agaagaggta cagaagtttg
961 tcttaagcta tccagatgtg atcttcttgg cagagaaaaa gtttaatgat aaaatagact
1021 gcctcatgga agaaaacatt agcatttcac aaataatcga aaatcctcgg gttctggatt
1081 caagcataag tactttaaaa agtcgaatca aagaattggt aaatgctggc tgtaacttga
1141 gtactttaaa catcactctt ctatcttgga gtaaaaaaag atatgaagct aaattgaaaa
1201 agttaagcag atttgcctaa ggatgccaat gtttttaatt ctcaggaact gtgaatatgt
1261 tatgccacat tgcaaaagaa ttttgcagaa gtgattaatt taaaatgtta ttaagggcct
1321 tgagatgggg agattatcct gaattacttt ggagggccta atataattgt agggatcttt
1381 aaaagttgaa gagggaggca aaagaggagg tcagagtgat cctgtataag aaagacaact
1441 acttttgaag gaagttaaaa ggtggctttg aaggaggaag acaccttgag ccaaggaatg
1501 aagggggcct gt
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