LOCUS BC127108 3475 bp mRNA linear HUM 06-NOV-2006
DEFINITION Homo sapiens mannosyl (alpha-1,3-)-glycoprotein
beta-1,4-N-acetylglucosaminyltransferase, isozyme A, mRNA (cDNA
clone MGC:150695 IMAGE:40124741), complete cds.
ACCESSION BC127108
VERSION BC127108.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3475)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3475)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 29 Row: p Column: 2.
FEATURES Location/Qualifiers
source 1..3475
/db_xref="H-InvDB:HIT000389166"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:150695 IMAGE:40124741"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: TTCATTCC sequenced from the reverse primer"
gene 1..3475
/gene="MGAT4A"
/gene_synonym="GNT-IV"
/gene_synonym="GNT-IVA"
/db_xref="GeneID:11320"
/db_xref="HGNC:HGNC:7047"
/db_xref="MIM:604623"
CDS 213..1820
/gene="MGAT4A"
/gene_synonym="GNT-IV"
/gene_synonym="GNT-IVA"
/codon_start=1
/product="MGAT4A protein"
/protein_id="AAI27109.1"
/db_xref="GeneID:11320"
/db_xref="HGNC:HGNC:7047"
/db_xref="MIM:604623"
/translation="MRLRNGTVATALAFITSFLTLSWYTTWQNGKEKLIAYQREFLAL
KERLRIAEHRISQRSSELNTIVQQFKRVGAETNGSKDALNKFSDNTLKLLKELTSKKS
LQVPSIYYHLPHLLKNEGSLQPAVQIGNGRTGVSIVMGIPTVKREVKSYLIETLHSLI
DNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEKEFSKEISSGLVEVISPPESYYPDL
TNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYYIQLEDDIIVKQNYFNTIKNF
ALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFMFYKEKPIDWLLDHILWVKVC
NPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQKLTDKDYMKPLLLKIHVNP
PAEVSTSLKVYQGHTLEKTYMGEDFFWAITPIAGDYILFKFDKPVNVESYLFHSGNQE
HPGDILLNTTVEVLPFKSEGLEISKETKDKRLEDGYFRIGKFENGVAEGMVDPSLNPI
SAFRLSVIQNSAVWAILNEIHIKKATN"
BASE COUNT 1076 a 623 c 645 g 1131 t
ORIGIN
1 gcgtgtgaag accgcaaaga cgatcccgag tacagttgtg aacagcattg ctgctaggct
61 cctcctgcag atcatctgaa atgaacctct cttattgatt tttattggcc tagagccagg
121 agtactgcat tcagttgact ttcagggtaa aaagaaaaca gtcctggttg ttgtcatcat
181 aaacatatgg accagtgtga tggtgaaatg agatgaggct ccgcaatgga actgtagcca
241 ctgctttagc atttatcact tccttcctta ctttgtcttg gtatactaca tggcaaaatg
301 ggaaagaaaa actgattgct tatcaacgag aattccttgc tttgaaagaa cgtcttcgaa
361 tagctgaaca cagaatctca cagcgctctt ctgaattaaa tacgattgtg caacagttca
421 agcgtgtagg agcagaaaca aatggaagta aggatgcgtt gaataagttt tcagataata
481 ccctaaagct gttaaaggag ttaacaagca aaaaatctct tcaagtgcca agtatttatt
541 atcatttgcc tcatttattg aaaaatgaag gaagtcttca acctgctgta cagattggca
601 atggaagaac aggagtttca atagtcatgg gcattcccac agtgaagaga gaagttaaat
661 cttacctcat agaaactctt cattccctta ttgataacct gtatcctgaa gagaagttgg
721 actgtgttat agtagtcttc ataggagaga cagatattga ttatgtacat ggtgttgtag
781 ccaacctgga gaaagaattt tctaaagaaa tcagttctgg cttggtggaa gtcatatcac
841 cccctgaaag ctattatcct gacttgacaa acctaaagga gacatttgga gactccaaag
901 aaagagtaag atggagaaca aagcaaaacc tagattactg ttttctaatg atgtatgctc
961 aagaaaaggg catatattac attcagcttg aagatgatat tattgtcaaa caaaattatt
1021 ttaataccat aaaaaatttt gcacttcaac tttcttctga ggaatggatg attctagagt
1081 tttcccagct gggcttcatt ggtaaaatgt ttcaagcgcc ggatcttact ctgattgtag
1141 aattcatatt catgttttac aaggagaaac ccattgattg gctcctggac catattctct
1201 gggtgaaagt ctgcaaccct gaaaaagatg caaaacattg tgatagacag aaagcaaatc
1261 tgcgaattcg cttcagacct tcccttttcc aacatgttgg tctgcactca tcactatcag
1321 gaaaaatcca aaaactcacg gataaagatt atatgaaacc attacttctt aaaatccatg
1381 taaacccacc tgcggaggta tctacttcct tgaaggtcta ccaagggcat acgctggaga
1441 aaacttacat gggagaggat ttcttctggg ctatcacacc gatagctgga gactacatct
1501 tgtttaaatt tgataaacca gtcaatgtag aaagttattt gttccatagc ggcaaccaag
1561 aacatcctgg agatattctg ctaaacacaa ctgtggaagt tttgcctttt aagagtgaag
1621 gtttggaaat aagcaaagaa accaaagaca aacgattaga agatggctat ttcagaatag
1681 gaaaatttga gaatggtgtt gcagaaggaa tggtggatcc aagtctcaat cccatttcag
1741 cctttcgact ttcagttatt cagaattctg ctgtttgggc cattcttaat gagattcata
1801 ttaaaaaagc caccaactga tcatctgaga aaccaacaca ttttttcctg tgaatttgtt
1861 aattaaagat agttaagcat gtatcttttt tttatttcta cttgaacact acctcttgtg
1921 aagtctactg tagataagac gattgtcatt tccacttgga aagtgaatct cccataataa
1981 ttgtatttgt ttgaaactaa gctgtcctca gattttaact tgactcaaac atttttcaat
2041 tatgacagcc tgttaatatg acttgtacta ttttggtatt atactaatac ataagagttg
2101 tacatattgt tacattcttt aaatttgaga aaaactaatg ttacatacat tttatgaagg
2161 gggtactttt gaggttcact tattttacta ttatagaccc tcttttatag attatcaggg
2221 attatatata taaatatata aatatacata aaaatgttat ggaattaatt tattagaaac
2281 acttaagaag tacatatttt tgtgcagtag atttttgaat cgatactttt tttgaaaacc
2341 agtttccttg cttttttaag ttctttctat atttttcttt ggaaatgcaa acattacaaa
2401 ccaatgccat ttttcaaatg cactgccatt taagattgat tatagatgga tttcttaatt
2461 gaagtacttt tataatcaca gtgactgaac aaaatatttt caaagacatt tgtcattcct
2521 taaagccaag attttaaaga ctaatgtcct tcctgagggt tactttacta tactgtgtat
2581 ggtgtatagc cacagaaagt cagtctgata aattttcaat gtgtaagtgt gatgcattca
2641 acccagatta ttgtagactt aacttattat atttcctctg atatgtaaaa tgacaaactc
2701 ttctttcctt tttaatcttt gtctttaatc catgaattag gtgcattatc tgctgttgat
2761 tcttttatat ctgcactcat tttatgacgt cagacaaaat gttttctagg tgttgctatt
2821 gtatgagtca taattggtat aattttaaag aaaattgtaa tattgttttt tggtgaaata
2881 tattattagt agtatatttt ccaaaatgat tttattgtag tatgaactga taagtgagtc
2941 ccgtgtccaa gagactgtat ttattactct taaacacgct attccaaatg atattactac
3001 tataaacaaa gaatattacc ggtctcagca atcagtgatc tttataaaag tacttttaaa
3061 aaatgatgaa ttatcaccag gcgctgtggc tcacgcctgt aatcccagca ctttgggagg
3121 ccgaggcggg cggatcacga ggtcaggaga tcaagaccat cctggctaac acggtgaaac
3181 cctgtctcta ctaaaaatac aaaaaattag ccaggcgtgg tggcaggtgc ctgtaatctc
3241 agcctcccaa agtgctggga ttataggtgt gtgccaccat gtccagcccc ctttctctct
3301 cttaactccc tctccctgct gtcgttgcca tactcttgca tacacaatcg gttgtctagt
3361 ttttgattgt ttgtgtgtat ggtgtgtgct gtctctctga ccagatttca ggttcctgag
3421 gcgagcctgc agctcatact gctcatctgt cctctcctat ggtgggtgct caggg
//