LOCUS BC118568 787 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens poly(A) binding protein, cytoplasmic 4 (inducible
form), mRNA (cDNA clone IMAGE:40031816), complete cds.
ACCESSION BC118568
VERSION BC118568.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 787)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 787)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUN-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 26 Row: e Column: 17
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..787
/db_xref="H-InvDB:HIT000387852"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40031816"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO"
gene 1..787
/gene="PABPC4"
/gene_synonym="APP-1"
/gene_synonym="APP1"
/gene_synonym="iPABP"
/gene_synonym="PABP4"
/db_xref="GeneID:8761"
/db_xref="HGNC:HGNC:8557"
/db_xref="MIM:603407"
CDS 29..787
/gene="PABPC4"
/gene_synonym="APP-1"
/gene_synonym="APP1"
/gene_synonym="iPABP"
/gene_synonym="PABP4"
/codon_start=1
/product="PABPC4 protein"
/protein_id="AAI18569.1"
/db_xref="GeneID:8761"
/db_xref="HGNC:HGNC:8557"
/db_xref="MIM:603407"
/translation="MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGV
NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTE
MNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFV
PAVPQAQGRPPYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPT
GNAPASRGLPTTTQRVGVPTAVQNLAPRAAVPSR"
BASE COUNT 226 a 185 c 206 g 170 t
ORIGIN
1 cagttggtag cagcggctag tggaagagat gaatggaaaa gaaataagtg gtaaaatcat
61 atttgtaggc cgtgcacaaa agaaagtaga acggcaggca gagttaaaac ggaaatttga
121 acagttgaaa caggagagaa ttagtcgata tcagggggtg aatctctaca ttaagaactt
181 ggatgacact attgatgatg agaaattaag gaaagaattt tctccttttg gatcaattac
241 cagtgctaag gtaatgctgg aggatggaag aagcaaaggg tttggcttcg tctgcttctc
301 atctcctgaa gaagcaacca aagcagtcac tgagatgaat ggacgcattg tgggctccaa
361 gccactatat gttgccctgg cccagaggaa ggaagagaga aaggctcacc tgaccaacca
421 gtatatgcaa cgagtggctg gaatgagagc acttcctgcc aatgccatct taaatcagtt
481 ccagcctgca gcgggtggct actttgtgcc agcagtccca caggctcagg gaaggcctcc
541 atattataca cctaaccagt tagcacagat gaggcctaat ccacgctggc agcaaggtgg
601 gagacctcaa ggcttccaag gaatgccaag tgctatacgc cagtctgggc ctcgtccaac
661 tcttcgccat ctggctccaa ctggtaatgc tccggcctct cgtggcctcc ctactaccac
721 tcagagagtc ggcgttccca cagctgtgca gaacttagcg ccacgcgctg ctgtcccaag
781 ccgctga
//