LOCUS BC113418 2656 bp mRNA linear HUM 29-JUN-2006 DEFINITION Homo sapiens T-box, brain, 1, mRNA (cDNA clone MGC:141978 IMAGE:8322470), complete cds. ACCESSION BC113418 VERSION BC113418.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2656) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2656) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 5 Row: c Column: 12. FEATURES Location/Qualifiers source 1..2656 /db_xref="H-InvDB:HIT000386871" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:141978 IMAGE:8322470" /tissue_type="Brain, cerebral cortex and lung, PCR rescued clones" /clone_lib="NIH_MGC_322" /note="Vector: pCR4-TOPO; Clone identification sequence tag: TGCTAGAT" gene 1..2656 /gene="TBR1" /gene_synonym="TES-56" /db_xref="GeneID:10716" /db_xref="HGNC:HGNC:11590" /db_xref="MIM:604616" CDS 246..2294 /gene="TBR1" /gene_synonym="TES-56" /codon_start=1 /product="T-box, brain, 1" /protein_id="AAI13419.1" /db_xref="GeneID:10716" /db_xref="HGNC:HGNC:11590" /db_xref="MIM:604616" /translation="MQLEHCLSPSIMLSKKFLNVSSSYPHSGGSELVLHDHPIISTTD NLERSSPLKKITRGMTNQSDTDNFPDSKDSPGDVQRSKLSPVLDGVSELRHSFDGSAA DRYLLSQSSQPQSAATAPSAMFPYPGQHGPAHPAFSIGSPSRYMAHHPVITNGAYNSL LSNSSPQGYPTAGYPYPQQYGHSYQGAPFYQFSSTQPGLVPGKAQVYLCNRPLWLKFH RHQTEMIITKQGRRMFPFLSFNISGLDPTAHYNIFVDVILADPNHWRFQGGKWVPCGK ADTNVQGNRVYMHPDSPNTGAHWMRQEISFGKLKLTNNKGASNNNGQMVVLQSLHKYQ PRLHVVEVNEDGTEDTSQPGRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPFAKGFR DNYDTIYTGCDMDRLTPSPNDSPRSQIVPGARYAMAGSFLQDQFVSNYAKARFHPGAG AGPGPGTDRSVPHTNGLLSPQQAEDPGAPSPQRWFVTPANNRLDFAASAYDTATDFAG NAATLLSYAAAGVKALPLQAAGCTGRPLGYYADPSGWGARSPPQYCGTKSGSVLPCWP NSAAAAARMAGANPYLGEEAEGLAAERSPLPPGAAEDAKPKDLSDSSWIETPSSIKSI DSSDSGIYEQAKRRRISPADTPVSESSSPLKSEVLAQRDCEKNCAKDISGYYGFYSHS " BASE COUNT 549 a 877 c 682 g 548 t ORIGIN 1 tggcaggagc cgtttcatcg gctgcacaag cagcaagatc aaaagtgagc cttttctgat 61 tgctgcatag tgtcaattgg ccaatctctt ctcccaggga aaaaaaaaag taaatcaaac 121 ctttgagaag catttgctgg ttgaagtgct ttctgtctag tgagggggtc tgtggatttc 181 tagtttatga taaataggac tttaaaaacc agggacggga gggcgagtgt tcaggttcta 241 gagctatgca gctggagcac tgcctttctc cttctatcat gctctccaag aaatttctca 301 atgtgagcag cagctaccca cattcaggcg gatccgagct tgtcttgcac gatcatccca 361 ttatctcgac cactgacaac ctggagagaa gttcaccttt gaaaaaaatt accaggggga 421 tgacgaatca gtcagataca gacaattttc ctgactccaa ggactcacca ggggacgtcc 481 agagaagtaa actctctcct gtcttggacg gggtctctga gcttcgtcac agtttcgatg 541 gctctgctgc agatcgctac ctcctctctc agtccagcca gccacagtct gcggccactg 601 ctcccagtgc catgttcccg taccccggcc agcacggacc ggcgcacccc gccttctcca 661 tcggcagccc tagccgctac atggcccacc acccggtcat caccaacgga gcctacaaca 721 gcctcctgtc caactcctcg ccgcagggat accccacggc cggctacccc tacccacagc 781 agtacggcca ctcctaccaa ggagctccgt tctaccagtt ctcctccacc cagccggggc 841 tggtgcccgg caaagcacag gtgtacctgt gcaacaggcc cctttggctg aaatttcacc 901 ggcaccaaac ggagatgatc atcaccaaac agggaaggcg catgtttcct tttttaagtt 961 ttaacatttc tggtctcgat cccacggctc attacaatat ttttgtggat gtgattttgg 1021 cggatcccaa tcactggagg tttcaaggag gcaaatgggt tccttgcggc aaagcggaca 1081 ccaatgtgca aggaaatcgg gtctatatgc atccggattc ccccaacact ggggctcact 1141 ggatgcgcca agaaatctct tttggaaaat taaaacttac gaacaacaaa ggagcttcaa 1201 ataacaatgg gcagatggtg gttttacagt ccttgcacaa gtaccagccc cgcctgcatg 1261 tggtggaagt gaacgaggac ggcacggagg acactagcca gcccggccgc gtgcagacgt 1321 tcactttccc tgagactcag ttcatcgccg tcaccgccta ccagaacacg gatattacac 1381 aactgaaaat agatcacaac ccttttgcaa aaggatttcg ggataattat gacacgatct 1441 acaccggctg tgacatggac cgcctgaccc cctcgcccaa cgactcgccg cgctcgcaga 1501 tcgtgcccgg ggcccgctac gccatggccg gctctttcct gcaggaccag ttcgtgagca 1561 actacgccaa ggcccgcttc cacccgggcg cgggcgcggg ccccgggccg ggtacggacc 1621 gcagcgtgcc gcacaccaac gggctgctgt cgccgcagca ggccgaggac ccgggcgcgc 1681 cctcgccgca acgctggttt gtgacgccgg ccaacaaccg gctggacttc gcggcctcgg 1741 cctatgacac ggccacggac ttcgcgggca acgcggccac gctgctctct tacgcggcgg 1801 cgggcgtgaa ggcgctgccg ctgcaggctg caggctgcac tggccgcccg ctcggctact 1861 acgccgaccc gtcgggctgg ggcgcccgca gtcccccgca gtactgcggc accaagtcgg 1921 gctcggtgct gccctgctgg cccaacagcg ccgcggccgc cgcgcgcatg gccggcgcca 1981 atccctacct gggcgaggag gccgagggcc tggccgccga gcgctcgccg ctgccgcccg 2041 gcgccgccga ggacgccaag cccaaggacc tgtccgattc cagctggatc gagacgccct 2101 cctcgatcaa gtccatcgac tccagcgact cggggattta cgagcaggcc aagcggaggc 2161 ggatctcgcc ggccgacacg cccgtgtccg agagttcgtc cccgctcaag agcgaggtgc 2221 tggcccagcg ggactgcgag aagaactgcg ccaaggacat tagcggctac tatggcttct 2281 actcgcacag ctaggccgcc cctgcccgcc cggccccgcc gcggcccgga cccccagcca 2341 gcccctcaca gctcttcccc agctccgcct ccccacactc ctccttgcgc acccactcat 2401 tttatttgac cctcgatggc cgtctgcagc gaataagtgc aggtctccga gcgtgatttt 2461 aacctttttt gcacagcagt ctctgcaatt agctcaccga ccttcaactt tgctgtaaac 2521 cttttggttt tcctacttac tcttcttctg tggagttatc ctcctacaat tcccctcccc 2581 ctcgtctttc tcttacctcc tacttctctt tcttgtaatg aaactcttca cctttaggag 2641 acctgggcag tcctgt //