LOCUS       BC111750                3244 bp    mRNA    linear   HUM 21-JUL-2006
DEFINITION  Homo sapiens interferon induced with helicase C domain 1, mRNA
            (cDNA clone MGC:133047 IMAGE:40008600), complete cds.
ACCESSION   BC111750
VERSION     BC111750.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3244)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3244)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2006) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Baylor Human Genome Sequencing Center
            cDNA Library Preparation: Baylor Human Genome Sequencing Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAM Plate: 17 Row: b Column: 5.
FEATURES             Location/Qualifiers
     source          1..3244
                     /db_xref="H-InvDB:HIT000340016"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:133047 IMAGE:40008600"
                     /tissue_type="PCR rescued clones"
                     /clone_lib="NIH_MGC_283"
                     /note="Vector: pCR-Blunt II-TOPO with reversed insert;
                     Clone identification sequence tag: TTAAGGA"
     gene            1..3244
                     /gene="IFIH1"
                     /gene_synonym="Hlcd"
                     /gene_synonym="IDDM19"
                     /gene_synonym="MDA-5"
                     /gene_synonym="MDA5"
                     /db_xref="GeneID:64135"
                     /db_xref="HGNC:HGNC:18873"
                     /db_xref="MIM:606951"
     CDS             69..3146
                     /gene="IFIH1"
                     /gene_synonym="Hlcd"
                     /gene_synonym="IDDM19"
                     /gene_synonym="MDA-5"
                     /gene_synonym="MDA5"
                     /codon_start=1
                     /product="interferon induced with helicase C domain 1"
                     /protein_id="AAI11751.1"
                     /db_xref="GeneID:64135"
                     /db_xref="HGNC:HGNC:18873"
                     /db_xref="MIM:606951"
                     /translation="MSNGYSTDENFRYLISCFRARVKMYIQVEPVLDYLTFLPAEVKE
                     QIQRTVATSGNMQAVELLLSTLEKGVWHLGWTREFVEALRRTGSPLAARYMNPELTDL
                     PSPSFENAHDEYLQLLNLLQPTLVDKLLVRDVLDKCMEEELLTIEDRNRIAAAENNGN
                     ESGVRELLKRIVQKENWFSAFLNVLRQTGNNELVQELTGSDCSESNAEIENLSQVDGP
                     QVEEQLLSTTVQPNLEKEVWGMENNSSESSFADSSVVSESDTSLAEGSVSCLDESLGH
                     NSNMGSDSGTMGSDSDEENVAARASPEPELQLRPYQMEVAQPALEGKNIIICLPTGSG
                     KTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLLVEQLFRKEFQPFLKKWYRVIGLSG
                     DTQLKISFPEVVKSCDIIISTAQILENSLLNLENGEDAGVQLSDFSLIIIDECHHTNK
                     EAVYNNIMRHYLMQKLKNNRLKKENKPVIPLPQILGLTASPGVGGATKQAKAEEHILK
                     LCANLDAFTIKTVKENLDQLKNQIQEPCKKFAIADATREDPFKEKLLEIMTRIQTYCQ
                     MSPMSDFGTQPYEQWAIQMEKKAAKEGNRKERVCAEHLRKYNEALQINDTIRMIDAYT
                     HLETFYNEEKDKKFAVIEDDSDEGGDDEYCDGDEDEDDLKKPLKLDETDRFLMTLFFE
                     NNKMLKRLAENPEYENEKLTKLRNTIMEQYTRTEESARGIIFTKTRQSAYALSQWITE
                     NEKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDI
                     KECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSGSGVIERETVNDFREKMMYK
                     AIHCVQNMKPEEYAHKILELQMQSIMEKKMKTKRNIAKHYKNNPSLITFLCKNCSVLA
                     CSGEDIHVIEKMHHVNMTPEFKELYIVRENKTLQKKCADYQINGEIICKCGQAWGTMM
                     VHKGLDLPCLKIRNFVVVFKNNSTKKQYKKWVELPITFPNLDYSECCLFSDED"
BASE COUNT         1112 a          609 c          719 g          804 t
ORIGIN      
        1 ttcacctgtc ccgcagacaa cagcaccatc tgcttgggag aaccctctcc cttctctgag
       61 aaagaaagat gtcgaatggg tattccacag acgagaattt ccgctatctc atctcgtgct
      121 tcagggccag ggtgaaaatg tacatccagg tggagcctgt gctggactac ctgacctttc
      181 tgcctgcaga ggtgaaggag cagattcaga ggacagtcgc cacctccggg aacatgcagg
      241 cagttgaact gctgctgagc accttggaga agggagtctg gcaccttggt tggactcggg
      301 aattcgtgga ggccctccgg agaaccggca gccctctggc cgcccgctac atgaaccctg
      361 agctcacgga cttgccctct ccatcgtttg agaacgctca tgatgaatat ctccaactgc
      421 tgaacctcct tcagcccact ctggtggaca agcttctagt tagagacgtc ttggataagt
      481 gcatggagga ggaactgttg acaattgaag acagaaaccg gattgctgct gcagaaaaca
      541 atggaaatga atcaggtgta agagagctac taaaaaggat tgtgcagaaa gaaaactggt
      601 tctctgcatt tctgaatgtt cttcgtcaaa caggaaacaa tgaacttgtc caagagttaa
      661 caggctctga ttgctcagaa agcaatgcag agattgagaa tttatcacaa gttgatggtc
      721 ctcaagtgga agagcaactt ctttcaacca cagttcagcc aaatctggag aaggaggtct
      781 ggggcatgga gaataactca tcagaatcat cttttgcaga ttcttctgta gtttcagaat
      841 cagacacaag tttggcagaa ggaagtgtca gctgcttaga tgaaagtctt ggacataaca
      901 gcaacatggg cagtgattca ggcaccatgg gaagtgattc agatgaagag aatgtggcag
      961 caagagcatc cccggagcca gaactccagc tcaggcctta ccaaatggaa gttgcccagc
     1021 cagccttgga agggaagaat atcatcatct gcctccctac agggagtgga aaaaccagag
     1081 tggctgttta cattgccaag gatcacttag acaagaagaa aaaagcatct gagcctggaa
     1141 aagttatagt tcttgtcaat aaggtactgc tagttgaaca gctcttccgc aaggagttcc
     1201 aaccattttt gaagaaatgg tatcgtgtta ttggattaag tggtgatacc caactgaaaa
     1261 tatcatttcc agaagttgtc aagtcctgtg atattattat cagtacagct caaatccttg
     1321 aaaactccct cttaaacttg gaaaatggag aagatgctgg tgttcaattg tcagactttt
     1381 ccctcattat cattgatgaa tgtcatcaca ccaacaaaga agcagtgtat aataacatca
     1441 tgaggcatta tttgatgcag aagttgaaaa acaatagact caagaaagaa aacaaaccag
     1501 tgattcccct tcctcagata ctgggactaa cagcttcacc tggtgttgga ggggccacga
     1561 agcaagccaa agctgaagaa cacattttaa aactatgtgc caatcttgat gcatttacta
     1621 ttaaaactgt taaagaaaac cttgatcaac tgaaaaacca aatacaggag ccatgcaaga
     1681 agtttgccat tgcagatgca accagagaag atccatttaa agagaaactt ctagaaataa
     1741 tgacaaggat tcaaacttat tgtcaaatga gtccaatgtc agattttgga actcaaccct
     1801 atgaacaatg ggccattcaa atggaaaaaa aagctgcaaa agaaggaaat cgcaaagaac
     1861 gtgtttgtgc agaacatttg aggaagtaca atgaggccct acaaattaat gacacaattc
     1921 gaatgataga tgcgtatact catcttgaaa ctttctataa tgaagagaaa gataagaagt
     1981 ttgcagtcat agaagatgat agtgatgagg gtggtgatga tgagtattgt gatggtgatg
     2041 aagatgagga tgatttaaag aaacctttga aactggatga aacagataga tttctcatga
     2101 ctttattttt tgaaaacaat aaaatgttga aaaggctggc tgaaaaccca gaatatgaaa
     2161 atgaaaagct gaccaaatta agaaatacca taatggagca atatactagg actgaggaat
     2221 cagcacgagg aataatcttt acaaaaacac gacagagtgc atatgcgctt tcccagtgga
     2281 ttactgaaaa tgaaaaattt gctgaagtag gagtcaaagc ccaccatctg attggagctg
     2341 gacacagcag tgagttcaaa cccatgacac agaatgaaca aaaagaagtc attagtaaat
     2401 ttcgcactgg aaaaataaat ctgcttatcg ctaccacagt ggcagaagaa ggtctggata
     2461 ttaaagaatg taacattgtt atccgttatg gtctcgtcac caatgaaata gccatggtcc
     2521 aggcccgtgg tcgagccaga gctgatgaga gcacctacgt cctggttgct cacagtggtt
     2581 caggagttat cgaacgtgag acagttaatg atttccgaga gaagatgatg tataaagcta
     2641 tacattgtgt tcaaaatatg aaaccagagg agtatgctca taagattttg gaattacaga
     2701 tgcaaagtat aatggaaaag aaaatgaaaa ccaagagaaa tattgccaag cattacaaga
     2761 ataacccatc actaataact ttcctttgca aaaactgcag tgtgctagcc tgttctgggg
     2821 aagatatcca tgtaattgag aaaatgcatc acgtcaatat gaccccagaa ttcaaggaac
     2881 tttacattgt aagagaaaac aaaacactgc aaaagaagtg tgccgactat caaataaatg
     2941 gtgaaatcat ctgcaaatgt ggccaggctt ggggaacaat gatggtgcac aaaggcttag
     3001 atttgccttg tctcaaaata aggaattttg tagtggtttt caaaaataat tcaacaaaga
     3061 aacaatacaa aaagtgggta gaattaccta tcacatttcc caatcttgac tattcagaat
     3121 gctgtttatt tagtgatgag gattagcact tgattgaaga ttcttttaaa atactatcag
     3181 ttaaacattt aatatgatta tgattaatgt attcattatg ctacagaact gacataagaa
     3241 tcaa
//