LOCUS BC107569 2144 bp mRNA linear HUM 21-JUL-2006 DEFINITION Homo sapiens tRNA isopentenyltransferase 1, mRNA (cDNA clone MGC:104350 IMAGE:4594069), complete cds. ACCESSION BC107569 VERSION BC107569.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2144) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2144) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-OCT-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 61 Row: c Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 32306540. FEATURES Location/Qualifiers source 1..2144 /db_xref="H-InvDB:HIT000338777" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:104350 IMAGE:4594069" /tissue_type="Kidney" /clone_lib="NIH_MGC_75" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..2144 /gene="TRIT1" /gene_synonym="FLJ20061" /gene_synonym="IPT" /gene_synonym="MOD5" /db_xref="GeneID:54802" /db_xref="HGNC:HGNC:20286" CDS 20..1423 /gene="TRIT1" /gene_synonym="FLJ20061" /gene_synonym="IPT" /gene_synonym="MOD5" /codon_start=1 /product="tRNA isopentenyltransferase 1" /protein_id="AAI07570.1" /db_xref="GeneID:54802" /db_xref="HGNC:HGNC:20286" /translation="MASVAAARAVPVGSGLRGLQRTLPLVVILGATGTGKSTLALQLG QRLGGEIVSADSMQVYEGLDIITNKVSAQEQRICRHHMISFVDPLVTNYTVVDFRNRA TALIEDIFARDKIPIVVGGTNYYIESLLWKVLVNTKPQEMGTEKVIDRKVELEKEDGL VLHKRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGISHSEFLHRQHTEEGGGPLGGP LKFSNPCILWLHADQAVLDERLDKRVDDMLAAGLLEELRDFHRRYNQKNVSENSQDYQ HGIFQSIGFKEFHEYLITEGKCTLETSNQLLKKGIEALKQVTKRYARKQNRWVKNRFL SRPGPIVPPVYGLEVSDVSKWEESVLEPALEIVQSFIQGHKPTATPIKMPYNEAENKR SYHLCDLCDRIIIGDREWAAHIKSKSHLNQLKKRRRLDSDAVNTIESQSVSPDHNKEP KEKGSPGQNDQELKCSV" BASE COUNT 640 a 437 c 521 g 546 t ORIGIN 1 gggggcagac tgccataaga tggcgtccgt ggcggctgca cgagcagttc ccgtgggcag 61 tgggctcagg ggcctgcaac ggaccctacc tcttgtagtg attctcgggg ccacgggcac 121 cggcaaatcc acgctggcgt tgcagctagg ccagcggctc ggcggtgaga tcgtcagcgc 181 tgactccatg caggtctatg aaggcctaga catcatcacc aacaaggttt ctgcccaaga 241 gcagagaatc tgccggcacc acatgatcag ctttgtggat cctcttgtga ccaattacac 301 agtggtggac ttcagaaata gagcaactgc tctgattgaa gatatatttg cccgagacaa 361 aattcctatt gttgtgggag gaaccaatta ttacattgaa tctctgctct ggaaagttct 421 tgtcaatacc aagccccagg agatgggcac tgagaaagtg attgaccgaa aagtggagct 481 tgaaaaggag gatggtcttg tacttcacaa acgcctaagc caggtggacc cagaaatggc 541 tgccaagctg catccacatg acaaacgcaa agtggccagg agcttgcaag tttttgaaga 601 aacaggaatc tctcatagtg aatttctcca tcgtcaacat acggaagaag gtggtggtcc 661 ccttggaggt cctctgaagt tctctaaccc ttgcatcctt tggcttcatg ctgaccaggc 721 agttctagat gagcgcttgg ataagagggt ggatgacatg cttgctgctg ggctcttgga 781 ggaactaaga gattttcaca gacgctataa tcagaagaat gtttcggaaa atagccagga 841 ctatcaacat ggtatcttcc aatcaattgg cttcaaggaa tttcacgagt acctgatcac 901 tgagggaaaa tgcacactgg agactagtaa ccagcttcta aagaaaggta ttgaggctct 961 gaaacaagta actaagagat atgcccggaa acaaaaccga tgggttaaaa accgtttttt 1021 gagcagacct ggtcccattg tcccccctgt ctatggctta gaagtatctg atgtctcgaa 1081 gtgggaagag tctgttcttg aacctgctct tgaaatcgtg caaagtttca tccagggcca 1141 caagcctaca gccactccaa taaagatgcc atacaatgaa gctgagaaca agagaagtta 1201 tcacctgtgt gacctctgtg atcgaatcat cattggggat cgcgaatggg cagcgcacat 1261 aaaatccaaa tcccacttga accaactgaa gaaaagaaga agattggact cagatgctgt 1321 caacaccata gaaagtcaga gtgtttcccc agaccataac aaagaaccta aagagaaggg 1381 atccccaggg cagaatgatc aagagctgaa atgcagcgtt taagagacat gtccagtggc 1441 ctttggaaag gtggtgggga tccagttcag gagggagggg tatgtttgtc tcccagtctg 1501 ggcaaaggag tgctatgcgg aattctctgc atagcagaaa agctcccacc attttctttt 1561 gatgtggttt taaagtctca cgttctctat aatagaaaca gcaggtcttg tcagctcctt 1621 gtgtggctga tgtgtctgga aatgatgtag ttcaggaaag catttttttt ttctttgaac 1681 cttaaaggtt ctattattaa aagcagcaca gattccacat ttttatacat gaggatcttc 1741 cttgtggtga ataccaggat tgactgcatc cctttaaaga agttttatgt ctctgactct 1801 ggctaaaatt atctaatttc cagatgcttt tgtagatgac tgaagtattt gtgagccaca 1861 tattgggagt tctagatttg agtgaatggc aggaaagggc catctccatt gagatgatta 1921 agtgaaccaa actagttctc agaattctac agagaaggag ggaatcagac tgaggaagct 1981 gtgacatagg acttgaagac caaagacttt gaaatttgcg agctgctcat gtgtgagtta 2041 ttatcactgc tgtctttcta ttgagttaca aatctatatt tttattgaag tttaaataaa 2101 gaaaaaattt acaataaaaa aaaaaaaaaa aaaaaaaaaa aaaa //