LOCUS BC107420 1219 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens aminocarboxymuconate semialdehyde decarboxylase, mRNA
(cDNA clone MGC:111184 IMAGE:4594027), complete cds.
ACCESSION BC107420
VERSION BC107420.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1219)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1219)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 61 Row: c Column: 19.
FEATURES Location/Qualifiers
source 1..1219
/db_xref="H-InvDB:HIT000338742"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:111184 IMAGE:4594027"
/tissue_type="Kidney"
/clone_lib="NIH_MGC_75"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1219
/gene="ACMSD"
/db_xref="GeneID:130013"
/db_xref="HGNC:HGNC:19288"
/db_xref="MIM:608889"
CDS 8..1018
/gene="ACMSD"
/codon_start=1
/product="aminocarboxymuconate semialdehyde decarboxylase"
/protein_id="AAI07421.1"
/db_xref="GeneID:130013"
/db_xref="HGNC:HGNC:19288"
/db_xref="MIM:608889"
/translation="MKIDIHSHILPKEWPDLKKRFGYGGWVQLQHHSKGEAKLLKDGK
VFRVVRENCWDPEVRIREMDQKGVTVQALSTVPVMFSYWAKPEDTLNLCQLLNNDLAS
TVVSYPRRFVGLGTLPMQAPELAVKEMERCVKELGFPGVQIGTHVNEWDLNAQELFPV
YAAAERLKCSLFVHPWDMQMDGRMAKYWLPWLVGMPAETTIAICSMIMGGVFEKFPKL
KVCFAHGGGAFPFTVGRISHGFSMRPDLCAQDNPMNPKKYLGSFYTDALVHDPLSLKL
LTDVIGKDKVILGTDYPFPLGELEPGKLIESMEEFDEETKNKLKAGNALAFLGLERKQ
FE"
BASE COUNT 371 a 257 c 293 g 298 t
ORIGIN
1 gggggagatg aaaattgaca tccatagtca tattctacca aaagaatggc cagatctaaa
61 aaagaggttt ggctacggag gctgggtgca gctccaacac cacagcaagg gagaagcaaa
121 gttgttgaaa gatgggaaag tcttcagagt ggtgcgagag aattgctggg atccagaagt
181 tcgtattaga gaaatggacc aaaaaggagt aacagtgcaa gccctttcca cagttcctgt
241 catgtttagc tactgggcca aacctgagga cactttaaac ctgtgccagc ttttaaacaa
301 cgaccttgcc agcaccgttg tgagctaccc caggaggttc gtgggtctgg ggacgttgcc
361 catgcaggcc cctgagctgg cggtcaagga gatggagcgc tgtgtgaaag agctgggctt
421 tcccggggtc caaattggca cccacgtcaa cgagtgggac ctgaacgcgc aggagctctt
481 tcctgtctat gcggcagccg aaaggctgaa gtgttccctg ttcgtgcatc cctgggacat
541 gcagatggat ggacgaatgg ccaaatactg gctcccttgg cttgtaggaa tgccagcaga
601 gaccaccata gccatttgct ccatgatcat gggtggagta tttgagaagt ttcccaaact
661 gaaagtgtgt ttcgcacatg gtggtggtgc cttccccttc acagtgggaa gaatctccca
721 tggattcagc atgcgcccag atctgtgtgc ccaggacaac cccatgaacc cgaagaaata
781 ccttggttcc ttttacacag atgctttggt tcatgatcct ctgtccctca agctgttaac
841 agatgtcata ggaaaggata aagtcatttt gggaaccgat tacccctttc cactaggtga
901 gctggaacct gggaaactaa tagagtccat ggaagaattt gatgaagaaa caaagaataa
961 actcaaagcc ggcaatgccc tggcattttt gggtcttgag agaaaacaat ttgaatgact
1021 gaatttacta caaaggcaaa ctttcaaaag gatatctcat ttttgtttct aaatatgtat
1081 caacaggtat caacaaaatc ctattttgaa ctattttact cagaaatgaa tgtcccaaat
1141 atcctaaatt attcataata aaaatgattt gtaagtgttt tcattctgca aaaaaaaaaa
1201 aaaaaaaaaa aaaaaaaaa
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