LOCUS BC105109 879 bp mRNA linear HUM 06-MAR-2007
DEFINITION Homo sapiens CCAAT/enhancer binding protein (C/EBP), delta, mRNA
(cDNA clone MGC:132769 IMAGE:8144112), complete cds.
ACCESSION BC105109
VERSION BC105109.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 879)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 879)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 3 Row: o Column: 22.
FEATURES Location/Qualifiers
source 1..879
/db_xref="H-InvDB:HIT000338197"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:132769 IMAGE:8144112"
/tissue_type="Cerebellum, Uterus, Testis, PCR rescued
clones"
/clone_lib="NIH_MGC_338"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: ACCATATC"
gene 1..879
/gene="CEBPD"
/gene_synonym="C/EBP-delta"
/gene_synonym="CELF"
/gene_synonym="CRP3"
/gene_synonym="NF-IL6-beta"
/db_xref="GeneID:1052"
/db_xref="HGNC:HGNC:1835"
/db_xref="MIM:116898"
CDS 40..849
/gene="CEBPD"
/gene_synonym="C/EBP-delta"
/gene_synonym="CELF"
/gene_synonym="CRP3"
/gene_synonym="NF-IL6-beta"
/codon_start=1
/product="CCAAT/enhancer binding protein (C/EBP), delta"
/protein_id="AAI05110.1"
/db_xref="GeneID:1052"
/db_xref="HGNC:HGNC:1835"
/db_xref="MIM:116898"
/translation="MSAALFSLDGPARGAPWPAEPAPFYEPGRAGKPGRGAEPGALGE
PGAAAPAMYDDESAIDFSAYIDSMAAVPTLELCHDELFADLFNSNHKAGGAGPLELLP
GGPARPLGPGPAAPRLLKREPDWGDGDAPGSLLPAQVAACAQTVVSLAAAGQPTPPTS
PEPPRSSPRQTPAPGPAREKSAGKRGPDRGSPEYRQRRERNNIAVRKSRDKAKRRNQE
MQQKLVELSAENEKLHQRVEQLTRDLAGLRQFFKQLPSPPFLPAAGTADCR"
BASE COUNT 135 a 349 c 311 g 84 t
ORIGIN
1 acagcctcgc ttggacgcag agcccggccc gacgccgcca tgagcgccgc gctcttcagc
61 ctggacggcc cggcgcgcgg cgcgccctgg cctgcggagc ctgcgccctt ctacgaaccg
121 ggccgggcgg gcaagccggg ccgcggggcc gagccagggg ccctaggcga gccaggcgcc
181 gccgcccccg ccatgtacga cgacgagagc gccatcgact tcagcgccta catcgactcc
241 atggccgccg tgcccaccct ggagctgtgc cacgacgagc tcttcgccga cctcttcaac
301 agcaatcaca aggcgggcgg cgcggggccc ctggagcttc ttcccggcgg ccccgcgcgc
361 cccttgggcc cgggccctgc cgctccccgc ctgctcaagc gcgagcccga ctggggcgac
421 ggcgacgcgc ccggctcgct gttgcccgcg caggtggccg cgtgcgcaca gaccgtggtg
481 agcttggcgg ccgcagggca gcccaccccg cccacgtcgc cggagccgcc gcgcagcagc
541 cccaggcaga cccccgcgcc cggccccgcc cgggagaaga gcgccggcaa gaggggcccg
601 gaccgcggca gccccgagta ccggcagcgg cgcgagcgca acaacatcgc cgtgcgcaag
661 agccgcgaca aggccaagcg gcgcaaccag gagatgcagc agaagttggt ggagctgtcg
721 gctgagaacg agaagctgca ccagcgcgtg gagcagctca cgcgggacct ggccggcctc
781 cggcagttct tcaagcagct gcccagcccg cccttcctgc cggccgccgg gacagcagac
841 tgccggtaac gcgcggccgg ggcgggagag actcagcaa
//