LOCUS BC100977 1339 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens rhomboid, veinlet-like 3 (Drosophila), mRNA (cDNA
clone MGC:119300 IMAGE:40005246), complete cds.
ACCESSION BC100977
VERSION BC100977.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1339)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1339)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 5 Row: h Column: 5.
FEATURES Location/Qualifiers
source 1..1339
/db_xref="H-InvDB:HIT000336389"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:119300 IMAGE:40005246"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: TGATATAC sequenced from the reverse primer"
gene 1..1339
/gene="RHBDL3"
/gene_synonym="VRHO"
/db_xref="GeneID:162494"
/db_xref="HGNC:HGNC:16502"
CDS 15..1205
/gene="RHBDL3"
/gene_synonym="VRHO"
/codon_start=1
/product="RHBDL3 protein"
/protein_id="AAI00978.1"
/db_xref="GeneID:162494"
/db_xref="HGNC:HGNC:16502"
/translation="MGEHPSPGPAVAACAEAERIEELEPEAEERLPAAPEDFDPGNTG
YISTGKFRSLLESHSSKLDPHKREVLLALADSHADGQIGYQDFVSLMSNKRSNSFRQA
ILQGNRRLSSKALLEEKGLSLSQRLIRHVAYETLPREIDRKWYYDSYTCCPPPWFMIT
VTLLEVAFFLYNGVSLGQFVLQVTHPRYLKNSLVYHPQLRAQVWRYLTYIFMHAGIEH
LGLNVVLQLLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSVADMTAPVVGSSGGVYAL
VSAHLANIVMNWSGMKCQFKLLRMAVALICMSMEFGRAVWLRFHPSAYPPCPHPSFVA
HLGGVAVGITLGVVVLRNYEQRLQDQSLWWIFVAMYTVFVLFAVFWNIFAYTLLDLKL
PPPP"
BASE COUNT 248 a 399 c 413 g 279 t
ORIGIN
1 cccccgtctc ggccatgggc gagcacccca gcccgggccc cgcggtggcc gcctgcgccg
61 aggcggagcg catcgaggag ctggaacccg aggccgagga gcggctgccc gcggcgccgg
121 aggactttga ccctgggaac acaggctaca ttagcacagg caagttccgg agtcttctgg
181 agagccacag ctccaagctg gacccgcaca aaagggaggt cctcctggct cttgccgaca
241 gccacgcgga tgggcagatc ggctaccagg attttgtcag cctaatgagc aacaagcgtt
301 ccaacagctt ccgccaagcc atcctgcagg gcaaccgcag gctaagcagc aaggccctgc
361 tggaggagaa ggggctgagc ctctcgcagc gacttatccg ccatgtggcc tatgagaccc
421 tgccccggga aattgaccgc aagtggtact atgacagcta cacctgctgc cccccaccct
481 ggttcatgat cacagtcacg ctgctggagg ttgccttttt cctctacaat ggggtgtcac
541 taggtcaatt tgtactgcag gtaactcatc cacgttactt gaagaactcc ctggtttacc
601 acccacagct gcgagcacag gtttggcgct acctgacata catcttcatg catgcaggga
661 tagaacacct gggactcaat gtggtgctgc agctgctggt gggggtgccc ctggagatgg
721 tgcatggagc cacccgaatt gggcttgtct acgtggccgg tgttgtggca gggtccttgg
781 cagtgtctgt ggctgacatg accgctccag tcgtgggctc ttctggaggg gtgtatgctc
841 tcgtctctgc ccatctggcc aacattgtca tgaactggtc aggcatgaag tgccagttca
901 agctgctgcg gatggctgtg gcccttatct gtatgagcat ggagtttggg cgggccgtgt
961 ggctccgctt ccacccgtcg gcctatcccc cgtgccctca cccaagcttt gtggcgcact
1021 tgggtggcgt ggccgtgggc atcaccctgg gcgtggtggt cctgaggaac tacgagcaga
1081 ggctccagga ccagtcactg tggtggattt ttgtggccat gtacaccgtc ttcgtgctgt
1141 tcgctgtctt ctggaacatc tttgcctaca ccctgctgga cttaaagctg ccgcctcccc
1201 cctgagggct ggaggcccaa ggtcggggag gggagggaaa agcagcaccc acagggagcg
1261 cctgcgaggt ttcttctcat caccagctca gctaggccgg gcagacaagg acagaagact
1321 ctgggccact gtaatgttt
//